Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23779 Striga asiatica HOM05D005904 ORTHO05D007074 3.6e-100 368.2 183 100.0
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 8.7e-22 107.8 224 37.1
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 7.4e-21 104.8 218 37.6
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 4.8e-20 102.1 261 33.3
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 1.4e-19 100.5 198 37.4
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 7.6e-18 94.7 226 33.2
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 2.1e-15 86.7 216 32.9
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 2.3e-14 83.2 207 33.3
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 2.3e-14 83.2 211 31.8
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 6.7e-14 81.6 225 31.1
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 6.7e-14 81.6 180 36.7
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 1.5e-13 80.5 217 31.8
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 1.1e-11 74.3 138 37.0
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 1.1e-11 74.3 235 29.4
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 1.8e-11 73.6 220 30.0
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 2.4e-11 73.2 223 30.5
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 3.1e-11 72.8 192 31.8
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 5.3e-11 72.0 215 30.7
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 9.0e-11 71.2 209 30.1
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 9.0e-11 71.2 212 28.8
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.2e-10 70.9 217 30.9
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 1.2e-10 70.9 141 34.0
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 2.6e-10 69.7 218 31.2
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 3.4e-10 69.3 216 30.6
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 3.4e-10 69.3 145 33.1
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 4.5e-10 68.9 233 30.0
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 5.9e-10 68.6 216 28.7
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 5.9e-10 68.6 122 36.9
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 5.9e-10 68.6 128 35.9
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 5.9e-10 68.6 228 29.4
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 1.3e-09 67.4 144 32.6
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 1.3e-09 67.4 140 36.4
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 1.3e-09 67.4 213 30.0
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 1.7e-09 67.0 130 32.3
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 1.7e-09 67.0 217 30.4
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 1.7e-09 67.0 217 30.4
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 1.7e-09 67.0 128 36.7
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 2.2e-09 66.6 218 30.3
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 2.2e-09 66.6 129 35.7
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 2.2e-09 66.6 211 28.9
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 2.9e-09 66.2 216 29.2
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 3.8e-09 65.9 129 33.3
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 5.0e-09 65.5 224 27.2
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 6.5e-09 65.1 128 35.9
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 6.5e-09 65.1 155 32.3
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 6.5e-09 65.1 215 28.8
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 6.5e-09 65.1 246 29.7
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 8.5e-09 64.7 219 29.7
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 8.5e-09 64.7 129 32.6
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 8.5e-09 64.7 128 34.4
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 1.1e-08 64.3 220 26.8
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 1.1e-08 64.3 219 29.7
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 1.1e-08 64.3 219 29.7
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 1.1e-08 64.3 223 29.1
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 1.1e-08 64.3 188 29.8
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 1.4e-08 63.9 224 28.1
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 1.4e-08 63.9 139 33.1
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 1.4e-08 63.9 128 34.4
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.9e-08 63.5 232 29.7
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 1.9e-08 63.5 128 34.4
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 1.9e-08 63.5 243 28.4
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 2.5e-08 63.2 207 30.9
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 3.2e-08 62.8 219 28.3
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 5.5e-08 62.0 129 36.4
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 5.5e-08 62.0 224 29.5
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 7.2e-08 61.6 224 29.0
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 9.4e-08 61.2 219 28.8
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 9.4e-08 61.2 227 28.6
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.1e-07 60.1 217 27.6
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 2.1e-07 60.1 215 27.9
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 2.1e-07 60.1 222 28.4
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 2.1e-07 60.1 238 28.6
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.7e-07 59.7 203 27.6
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.7e-07 59.7 128 33.6
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 2.7e-07 59.7 82 43.9
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 3.6e-07 59.3 128 32.8
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 4.6e-07 58.9 227 28.2
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 4.6e-07 58.9 159 28.9
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 4.6e-07 58.9 220 28.6
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 4.6e-07 58.9 226 28.8
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 4.6e-07 58.9 144 30.6
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 1.0e-06 57.8 170 28.8
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 1.0e-06 57.8 128 33.6
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 1.0e-06 57.8 224 28.6
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 1.4e-06 57.4 229 28.4
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 1.8e-06 57.0 97 38.1
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 3.0e-06 56.2 221 28.5
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 3.0e-06 56.2 220 28.2
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 3.9e-06 55.8 230 27.4
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 3.9e-06 55.8 128 32.8
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 3.9e-06 55.8 128 32.8
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 3.9e-06 55.8 186 26.3
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 5.1e-06 55.5 240 26.7
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 5.1e-06 55.5 207 27.1
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 6.7e-06 55.1 89 39.3
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 8.8e-06 54.7 82 39.0
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 8.8e-06 54.7 128 30.5


User provided reference genes

Program Settings