Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23757 Striga asiatica HOM05D007698 ORTHO05D009663 1.4e-78 296.2 149 100.0
MSTRG.19596 Avicennia marina HOM05D007698 ORTHO05D009663 8.0e-50 200.7 148 69.6
Oeu055888.1 Olea europaea HOM05D007698 ORTHO05D009663 4.3e-43 178.3 150 64.0
Migut.D01902 Erythranthe guttata HOM05D007698 ORTHO05D009663 1.4e-41 173.3 149 60.4
Hma1.2p1_0018F.1_g012410 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 1.6e-37 159.8 149 57.0
Hma1.2p1_2368F.1_g320690 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 2.7e-37 159.1 149 57.0
Peaxi162Scf00684g00033 Petunia axillaris HOM05D007698 ORTHO05D009663 7.8e-37 157.5 154 57.1
Ciclev10009487m.g Citrus clementina HOM05D007698 ORTHO05D009663 3.0e-36 155.6 149 57.7
Cfa003373 Carpinus fangiana HOM05D007698 ORTHO05D009663 6.6e-36 154.5 150 57.3
Nn2g12029 Nelumbo nucifera HOM05D007698 ORTHO05D009663 6.6e-36 154.5 149 56.4
Nitab4.5_0008782g0040 Nicotiana tabacum HOM05D007698 ORTHO05D009663 8.6e-36 154.1 152 55.9
Cpa.g.sc75.28 Carica papaya HOM05D007698 ORTHO05D009663 1.5e-35 153.3 144 56.9
Actinidia07425 Actinidia chinensis HOM05D007698 ORTHO05D009663 1.9e-35 152.9 148 56.1
Haze_25578 Corylus avellana HOM05D007698 ORTHO05D009663 1.9e-35 152.9 149 57.0
Atru.chr7.1161 Acer truncatum HOM05D007698 ORTHO05D009663 7.3e-35 151.0 149 55.7
EL10Ac8g18655 Beta vulgaris HOM05D007698 ORTHO05D009663 7.3e-35 151.0 152 53.9
Sc08g0006600 Simmondsia chinensis HOM05D007698 ORTHO05D009663 7.3e-35 151.0 152 53.9
DCAR_020920 Daucus carota HOM05D007698 ORTHO05D009663 9.5e-35 150.6 152 54.6
Solyc04g081330.4 Solanum lycopersicum HOM05D007698 ORTHO05D009663 9.5e-35 150.6 158 56.3
PGSC0003DMG400003777 Solanum tuberosum HOM05D007698 ORTHO05D009663 9.5e-35 150.6 158 55.7
CAN.G311.17 Capsicum annuum HOM05D007698 ORTHO05D009663 1.2e-34 150.2 154 57.1
CsaV3_2G002860 Cucumis sativus L. HOM05D007698 ORTHO05D009663 1.2e-34 150.2 145 57.9
Sed0013311 Sechium edule HOM05D007698 ORTHO05D009663 1.2e-34 150.2 146 56.8
ATR1120G147 Amborella trichopoda HOM05D007698 ORTHO05D009663 1.6e-34 149.8 116 64.7
Gohir.A06G056000 Gossypium hirsutum HOM05D007698 ORTHO05D009663 1.6e-34 149.8 149 55.0
Rhsim03G0248000 Rhododendron simsii HOM05D007698 ORTHO05D009663 1.6e-34 149.8 149 56.4
Eucgr.C01174 Eucalyptus grandis HOM05D007698 ORTHO05D009663 2.1e-34 149.4 149 56.4
Gohir.D06G054575 Gossypium hirsutum HOM05D007698 ORTHO05D009663 2.1e-34 149.4 149 55.0
Ca_21682_v3 Cicer arietinum L. HOM05D007698 ORTHO05D009663 2.8e-34 149.1 147 55.8
Manes.14G132100 Manihot esculenta HOM05D007698 ORTHO05D009663 2.8e-34 149.1 113 69.0
Sopen04g034950 Solanum pennellii HOM05D007698 ORTHO05D009663 3.6e-34 148.7 158 55.7
Cc06_g08510 Coffea canephora HOM05D007698 ORTHO05D009663 4.7e-34 148.3 152 54.6
MELO3C004507.2 Cucumis melo HOM05D007698 ORTHO05D009663 4.7e-34 148.3 145 57.9
ECA234G1302 Erigeron canadensis HOM05D007698 ORTHO05D009663 4.7e-34 148.3 152 54.6
Thecc.09G126500 Theobroma cacao HOM05D007698 ORTHO05D009663 4.7e-34 148.3 149 56.4
Hund26504 Selenicereus undatus HOM05D007698 ORTHO05D009663 6.2e-34 147.9 151 53.6
Gorai.010G064000 Gossypium raimondii HOM05D007698 ORTHO05D009663 8.1e-34 147.5 149 55.7
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 8.1e-34 147.5 89 79.8
Psat4g040160 Pisum sativum HOM05D007698 ORTHO05D009663 1.1e-33 147.1 152 54.6
Aqoxy7G02180 Aquilegia oxysepala HOM05D007698 ORTHO05D009663 1.4e-33 146.7 97 75.3
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.4e-33 146.7 89 79.8
FvH4_1g03270 Fragaria vesca HOM05D007698 ORTHO05D009663 1.8e-33 146.4 147 52.4
Lalb_Chr13g0301871 Lupinus albus HOM05D007698 ORTHO05D009663 1.8e-33 146.4 151 54.3
QL10p023449 Quercus lobata HOM05D007698 ORTHO05D009663 1.8e-33 146.4 151 55.6
RcHm_v2.0_Chr2g0088411 Rosa chinensis HOM05D007698 ORTHO05D009663 1.8e-33 146.4 147 51.7
GSVIVG01015531001 Vitis vinifera HOM05D007698 ORTHO05D009663 2.4e-33 146.0 151 55.0
FAN23G0447 Fragaria x ananassa HOM05D007698 ORTHO05D009663 4.0e-33 145.2 150 53.3
FAN28G0224 Fragaria x ananassa HOM05D007698 ORTHO05D009663 4.0e-33 145.2 150 53.3
PGR142G3861 Punica granatum HOM05D007698 ORTHO05D009663 4.0e-33 145.2 149 57.0
SEGI_02335 Sequoiadendron giganteum HOM05D007698 ORTHO05D009663 4.0e-33 145.2 151 55.0
HanXRQChr10g0315501 Helianthus annuus HOM05D007698 ORTHO05D009663 5.2e-33 144.8 156 54.5
Os05g0401200 Oryza sativa ssp. japonica HOM05D007698 ORTHO05D009663 5.2e-33 144.8 97 74.2
CiPaw.04G171100 Carya illinoinensis HOM05D007698 ORTHO05D009663 6.8e-33 144.4 150 55.3
CANSAT11G0563 Cannabis sativa HOM05D007698 ORTHO05D009663 8.9e-33 144.1 151 54.3
Medtr4g114410 Medicago truncatula HOM05D007698 ORTHO05D009663 8.9e-33 144.1 131 58.0
arahy.Tifrunner.gnm1.ann1.K2HWUU Arachis hypogaea HOM05D007698 ORTHO05D009663 1.2e-32 143.7 128 56.2
ClCG11G003040 Citrullus lanatus HOM05D007698 ORTHO05D009663 1.2e-32 143.7 159 52.8
arahy.Tifrunner.gnm1.ann1.W83AFC Arachis hypogaea HOM05D007698 ORTHO05D009663 1.5e-32 143.3 156 51.9
Nitab4.5_0010964g0010 Nicotiana tabacum HOM05D007698 ORTHO05D009663 1.5e-32 143.3 151 53.6
Prupe.7G243000 Prunus persica HOM05D007698 ORTHO05D009663 1.5e-32 143.3 146 52.7
VMungo1215G1358 Vigna mungo HOM05D007698 ORTHO05D009663 1.5e-32 143.3 150 50.0
MBI01_g36268_MAGBIO Magnolia biondii HOM05D007698 ORTHO05D009663 2.0e-32 142.9 120 63.3
TWI63G1008 Tripterygium wilfordii HOM05D007698 ORTHO05D009663 2.0e-32 142.9 149 53.7
FAN19G0166 Fragaria x ananassa HOM05D007698 ORTHO05D009663 2.6e-32 142.5 148 52.0
FAN26G2937 Fragaria x ananassa HOM05D007698 ORTHO05D009663 3.4e-32 142.1 159 48.4
Lj4g0022576 Lotus japonicus HOM05D007698 ORTHO05D009663 3.4e-32 142.1 100 69.0
Phvul.003G164400 Phaseolus vulgaris HOM05D007698 ORTHO05D009663 4.4e-32 141.7 129 54.3
Zm00001eb203770 Zea mays HOM05D007698 ORTHO05D009663 4.4e-32 141.7 118 61.9
arahy.Tifrunner.gnm1.ann1.DB6URZ Arachis hypogaea HOM05D007698 ORTHO05D009663 7.6e-32 141.0 128 55.5
TPR.G10704 Trifolium pratense HOM05D007698 ORTHO05D009663 9.9e-32 140.6 92 73.9
TAR625G0118 Trochodendron aralioides HOM05D007698 ORTHO05D009663 1.3e-31 140.2 94 69.1
AUR62013358 Chenopodium quinoa HOM05D007698 ORTHO05D009663 2.2e-31 139.4 174 48.3
Potri.006G069900 Populus trichocarpa HOM05D007698 ORTHO05D009663 2.2e-31 139.4 119 57.1
CDE06G2164 Ceratophyllum demersum HOM05D007698 ORTHO05D009663 2.9e-31 139.0 153 51.6
MD02G1032500 Malus domestica HOM05D007698 ORTHO05D009663 4.9e-31 138.3 145 51.7
PSO455G0268 Papaver somniferum HOM05D007698 ORTHO05D009663 3.2e-30 135.6 84 70.2
PSO170G4754 Papaver somniferum HOM05D007698 ORTHO05D009663 2.1e-29 132.9 84 69.0
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 2.1e-29 132.9 95 66.3
vmacro06130 Vaccinium macrocarpon HOM05D007698 ORTHO05D009663 2.1e-29 132.9 89 73.0
Pp3c7_12150 Physcomitrium patens HOM05D007698 ORTHO05D009663 2.7e-29 132.5 84 76.2
HPP92_024087 Vanilla planifolia HOM05D007698 ORTHO05D009663 8.7e-28 127.5 83 71.1
Mapoly0135s0019 Marchantia polymorpha HOM05D007698 ORTHO05D009663 4.7e-26 121.7 81 67.9
Glyma.13G167300 Glycine max HOM05D007698 ORTHO05D009663 2.6e-24 115.9 123 51.2
unitig_749.g14098 Utricularia gibba HOM05D007698 ORTHO05D009663 9.3e-22 107.5 80 66.2
arahy.Tifrunner.gnm1.ann1.UUR3FU Arachis hypogaea HOM05D007698 ORTHO05D009663 1.6e-21 106.7 65 75.4
Dinv36527 Davidia involucrata HOM05D007698 ORTHO05D009663 4.6e-21 105.1 124 50.8
AUR62011129 Chenopodium quinoa HOM05D007698 ORTHO05D009663 1.1e-17 94.0 83 61.4
Cre07.g323600 Chlamydomonas reinhardtii HOM05D007698 ORTHO05D009663 1.3e-12 77.0 84 42.9
Glyma.17G114902 Glycine max HOM05D007698 ORTHO05D009663 2.1e-10 69.7 46 73.9


User provided reference genes

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