Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 0.0e+00 1904.4 1047 100.0
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 8.5e-247 857.8 1074 53.8
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 3.3e-243 845.9 1243 48.5
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 8.9e-220 768.1 1231 46.9
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 1.3e-162 578.2 1237 40.6
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.8e-159 567.8 1105 44.3
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 2.2e-154 550.8 1130 40.1
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 5.3e-148 529.6 1247 39.1
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 5.0e-146 523.1 1260 36.1
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 1.1e-142 511.9 1244 37.7
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 2.6e-142 510.8 1237 37.8
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 3.1e-140 503.8 1273 36.4
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 1.2e-139 501.9 1300 37.0
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 2.6e-139 500.7 1286 36.1
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 5.9e-139 499.6 1253 37.5
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 3.2e-137 493.8 1152 39.3
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 4.7e-136 490.0 1274 37.8
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 3.9e-135 486.9 1127 39.8
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 7.4e-134 482.6 1132 40.0
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 1.4e-132 478.4 1253 36.4
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 9.1e-132 475.7 1253 36.5
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 1.0e-130 472.2 1223 36.3
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.0e-130 472.2 1044 40.6
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 1.3e-130 471.9 1264 37.5
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.9e-129 468.0 1148 37.7
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 9.4e-129 465.7 1189 38.5
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.2e-128 465.3 1022 40.5
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 1.0e-127 462.2 1257 35.6
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 6.7e-127 459.5 1244 35.0
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 1.7e-125 454.9 1263 37.4
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 8.3e-125 452.6 1214 34.4
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.1e-124 452.2 1263 37.5
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 1.4e-124 451.8 1250 36.2
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.4e-124 451.1 1261 37.6
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 3.5e-123 447.2 1200 37.3
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 4.5e-123 446.8 1264 33.5
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 7.7e-123 446.0 1266 36.5
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 1.7e-122 444.9 1257 35.9
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.9e-122 444.1 1264 35.8
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.8e-122 443.7 1259 37.0
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.2e-121 440.7 1269 36.5
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 5.5e-121 439.9 1297 34.7
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 9.4e-121 439.1 1220 34.6
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 1.6e-120 438.3 1266 35.0
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 4.7e-120 436.8 1170 37.7
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 4.7e-120 436.8 1229 35.8
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 1.4e-119 435.3 1268 32.9
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 1.8e-119 434.9 1072 38.2
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 3.0e-119 434.1 1257 34.1
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 6.8e-119 433.0 1244 35.5
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 7.5e-118 429.5 1197 33.3
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.3e-117 428.7 1283 34.2
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.3e-117 428.7 1243 35.9
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 6.3e-117 426.4 1263 34.8
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 1.1e-116 425.6 1232 33.7
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 5.4e-116 423.3 1254 32.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 1.7e-114 418.3 1271 34.2
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 1.1e-113 415.6 1258 35.6
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 7.2e-113 412.9 1165 35.4
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 3.6e-112 410.6 1105 35.9
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.0e-111 407.1 1103 35.5
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.4e-108 398.7 1260 31.7
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.1e-105 389.0 1254 34.5
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.1e-105 389.0 1309 32.1
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.9e-105 388.3 1264 32.4
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 4.7e-104 383.6 1251 35.3
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.4e-103 382.1 1225 36.2
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 1.2e-102 379.0 1262 31.9
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 2.0e-99 368.2 1169 33.4
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.7e-98 365.2 1227 33.3
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 3.0e-98 364.4 1241 31.8
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 1.1e-97 362.5 1260 32.3
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.9e-97 361.7 1274 32.1
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.1e-96 358.2 1177 33.6
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 2.8e-96 357.8 1251 34.4
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 1.2e-94 352.4 1193 33.4
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 1.5e-94 352.1 1258 33.3
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 2.0e-94 351.7 1280 30.7
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.5e-94 349.7 1412 32.2
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.9e-93 347.8 1126 31.7
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 2.4e-92 344.7 1183 31.7
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 2.7e-91 341.3 1221 32.6
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 4.6e-91 340.5 1258 29.7
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.1e-89 335.9 1164 30.8
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 4.0e-87 327.4 1184 33.4
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 2.6e-86 324.7 1168 33.0
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.7e-85 322.0 1107 33.3
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 2.9e-85 321.2 1106 33.3
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 8.3e-85 319.7 1104 33.2
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 8.3e-85 319.7 1104 33.2
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 2.4e-84 318.2 914 34.2
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 9.2e-84 316.2 1146 32.6
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 8.6e-82 309.7 1188 31.6
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 7.3e-81 306.6 1208 31.3
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 1.4e-79 302.4 1193 31.3
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.4e-76 292.4 1091 31.4
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.4e-76 292.4 430 46.3
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 5.3e-71 273.9 320 54.7
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 2.6e-70 271.6 1233 29.7
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 9.3e-68 263.1 1133 30.3
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 9.6e-65 253.1 1217 29.2
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 9.9e-62 243.0 976 29.4
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 1.4e-60 239.2 1020 31.4
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 1.7e-53 215.7 276 50.4
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 6.5e-53 213.8 1062 29.8
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 6.5e-53 213.8 1278 26.0
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 6.0e-51 207.2 378 42.3
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 7.9e-51 206.8 214 56.5
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 2.7e-43 181.8 1141 26.9
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 4.6e-43 181.0 903 28.3
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 6.1e-43 180.6 408 37.7
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 8.7e-42 176.8 1245 25.1
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 7.4e-41 173.7 1020 27.3
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 1.1e-39 169.9 189 53.4
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 2.9e-37 161.8 472 30.5
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 6.5e-37 160.6 1037 25.4
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 3.2e-36 158.3 453 34.0
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 4.2e-36 157.9 343 39.7
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 4.2e-36 157.9 419 34.6
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.1e-35 155.6 775 29.5
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 2.0e-33 149.1 382 35.3
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 2.2e-32 145.6 120 66.7
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 4.8e-32 144.4 129 62.8
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 4.8e-32 144.4 103 68.0
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 1.1e-31 143.3 392 31.9
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 2.4e-31 142.1 346 35.8
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 9.1e-31 140.2 221 43.4
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.6e-30 138.7 371 32.9
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 1.8e-26 125.9 894 26.8
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 7.4e-25 120.6 167 46.7
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.5e-20 104.4 172 43.0
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 1.4e-18 99.8 61 73.8
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.3e-18 99.0 128 51.6
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 1.3e-16 93.2 145 39.3
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 3.5e-14 85.1 126 47.6
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 2.9e-13 82.0 139 36.7
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 1.9e-12 79.3 128 46.1
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.0e-10 73.6 258 31.8
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 1.4e-10 73.2 170 35.9
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 1.3e-08 66.6 221 29.4
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 4.8e-08 64.7 74 51.4
SHI11166 Sapria himalayana HOM05D004845 ORTHO05D005957 8.3e-08 63.9 43 65.1
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.1e-07 62.0 64 51.6
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 7.0e-07 60.8 130 40.8
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 1.2e-06 60.1 215 29.3


User provided reference genes

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