Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23721 Striga asiatica HOM05D000027 ORTHO05D403502 2.4e-84 315.5 161 100.0
SGA_v2.0_scaffold265G46082 Striga asiatica HOM05D000027 ORTHO05D000500 1.0e-13 80.9 44 90.9
MSTRG.246 Avicennia marina HOM05D000027 ORTHO05D000500 2.4e-07 59.7 41 73.2
Peaxi162Scf00611g00218 Petunia axillaris HOM05D000027 ORTHO05D000500 7.0e-07 58.2 34 76.5
Oeu035131.1 Olea europaea HOM05D000027 ORTHO05D000500 1.6e-06 57.0 39 74.4
Dinv34445 Davidia involucrata HOM05D000027 ORTHO05D000500 2.0e-06 56.6 31 83.9
Dinv34446 Davidia involucrata HOM05D000027 ORTHO05D000500 2.0e-06 56.6 31 83.9
Sopen03g027430 Solanum pennellii HOM05D000027 ORTHO05D000500 2.0e-06 56.6 33 78.8
Atru.chr12.273 Acer truncatum HOM05D000027 ORTHO05D000500 3.5e-06 55.8 27 92.6
RcHm_v2.0_Chr1g0344701 Rosa chinensis HOM05D000027 ORTHO05D000500 3.5e-06 55.8 32 78.1
Potri.010G195600 Populus trichocarpa HOM05D000027 ORTHO05D000500 4.5e-06 55.5 33 72.7
Cfa001392 Carpinus fangiana HOM05D000027 ORTHO05D000500 5.9e-06 55.1 31 80.6
Haze_17158 Corylus avellana HOM05D000027 ORTHO05D000500 5.9e-06 55.1 33 75.8
Manes.10G020500 Manihot esculenta HOM05D000027 ORTHO05D000500 5.9e-06 55.1 31 77.4
TAR623G0190 Trochodendron aralioides HOM05D000027 ORTHO05D000500 5.9e-06 55.1 33 75.8


User provided reference genes

Program Settings