Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23709 Striga asiatica HOM05D002316 ORTHO05D002280 9.6e-199 696.8 401 100.0
SGA_v2.0_scaffold130G34313 Striga asiatica HOM05D002316 ORTHO05D002280 4.5e-63 246.1 348 53.2
Migut.H01980 Erythranthe guttata HOM05D002316 ORTHO05D002280 5.5e-45 186.0 366 41.3
MSTRG.14222 Avicennia marina HOM05D002316 ORTHO05D002280 1.3e-41 174.9 362 39.8
CAN.G292.5 Capsicum annuum HOM05D002316 ORTHO05D002280 1.9e-37 161.0 192 53.6
Solyc12g014220.3 Solanum lycopersicum HOM05D002316 ORTHO05D002280 3.0e-35 153.7 201 51.7
GSVIVG01014224001 Vitis vinifera HOM05D002316 ORTHO05D002280 4.0e-35 153.3 257 43.6
Dinv14972 Davidia involucrata HOM05D002316 ORTHO05D002280 2.6e-34 150.6 240 46.2
PGSC0003DMG400015334 Solanum tuberosum HOM05D002316 ORTHO05D002280 1.7e-33 147.9 185 53.0
Nitab4.5_0000035g0100 Nicotiana tabacum HOM05D002316 ORTHO05D002280 9.1e-32 142.1 208 47.1
Gohir.D13G153100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 1.2e-31 141.7 238 42.4
Gorai.013G173000 Gossypium raimondii HOM05D002316 ORTHO05D002280 1.2e-31 141.7 238 42.4
Peaxi162Scf00934g00148 Petunia axillaris HOM05D002316 ORTHO05D002280 1.2e-31 141.7 184 51.1
Lj8A150T53 Lonicera japonica HOM05D002316 ORTHO05D002280 1.9e-29 134.4 188 48.9
Oeu051116.1 Olea europaea HOM05D002316 ORTHO05D002280 3.2e-29 133.7 232 40.5
Nn1g09090 Nelumbo nucifera HOM05D002316 ORTHO05D002280 5.5e-29 132.9 242 41.3
ECA234G4357 Erigeron canadensis HOM05D002316 ORTHO05D002280 2.8e-28 130.6 233 40.8
MBI06_g25991_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 3.6e-28 130.2 262 43.9
PGR031G2525 Punica granatum HOM05D002316 ORTHO05D002280 1.0e-27 128.6 236 41.1
DCAR_017163 Daucus carota HOM05D002316 ORTHO05D002280 3.0e-27 127.1 234 40.6
Nitab4.5_0005440g0080 Nicotiana tabacum HOM05D002316 ORTHO05D002280 5.2e-27 126.3 220 42.3
Cc05_g11320 Coffea canephora HOM05D002316 ORTHO05D002280 8.8e-27 125.6 254 40.9
HanXRQChr12g0373471 Helianthus annuus HOM05D002316 ORTHO05D002280 2.0e-26 124.4 233 39.9
Lsat_1_v5_gn_5_127320 Lactuca sativa HOM05D000043 ORTHO05D009639 2.8e-25 120.6 132 53.8
TAR624G0302 Trochodendron aralioides HOM05D002316 ORTHO05D002280 3.7e-25 120.2 252 39.7
Sopen12g006010 Solanum pennellii HOM05D002316 ORTHO05D002280 1.1e-24 118.6 158 49.4
unitig_699.g19234 Utricularia gibba HOM05D002316 ORTHO05D002280 1.1e-24 118.6 231 39.4
PSO782G0144 Papaver somniferum HOM05D002478 ORTHO05D002280 5.4e-24 116.3 243 39.1
CANSAT35G1069 Cannabis sativa HOM05D002316 ORTHO05D002280 9.2e-24 115.5 242 37.2
TWI38G1868 Tripterygium wilfordii HOM05D002316 ORTHO05D002280 2.0e-23 114.4 200 42.0
Oeu061346.1 Olea europaea HOM05D002316 ORTHO05D002280 3.5e-23 113.6 232 37.1
Rhsim06G0205700 Rhododendron simsii HOM05D002316 ORTHO05D002280 4.5e-23 113.2 232 39.2
Thecc.07G106400 Theobroma cacao HOM05D002316 ORTHO05D002280 5.9e-23 112.8 185 44.9
PSO063G2003 Papaver somniferum HOM05D002478 ORTHO05D002280 1.0e-22 112.1 243 39.1
Manes.02G100500 Manihot esculenta HOM05D002316 ORTHO05D002280 1.3e-22 111.7 251 38.2
Aa31LG10G1890 Aethionema arabicum HOM05D002316 ORTHO05D002280 5.0e-22 109.8 217 36.9
Cpa.g.sc131.59 Carica papaya HOM05D002316 ORTHO05D002280 5.0e-22 109.8 225 38.2
vmacro17430 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 3.3e-21 107.1 252 37.7
COL.COLO4_17596 Corchorus olitorius HOM05D002316 ORTHO05D002280 4.7e-20 103.2 187 42.2
MD11G1260000 Malus domestica HOM05D002316 ORTHO05D002280 4.0e-19 100.1 239 37.2
Prupe.4G170000 Prunus persica HOM05D002316 ORTHO05D002280 4.0e-19 100.1 246 35.8
FAN21G3617 Fragaria x ananassa HOM05D002316 ORTHO05D002280 5.2e-19 99.8 233 36.1
Haze_09346 Corylus avellana HOM05D002316 ORTHO05D002280 6.8e-19 99.4 345 31.9
RcHm_v2.0_Chr5g0031441 Rosa chinensis HOM05D002316 ORTHO05D002280 8.9e-19 99.0 109 50.5
Actinidia12558 Actinidia chinensis HOM05D002316 ORTHO05D002280 2.0e-18 97.8 191 41.9
CiPaw.11G162400 Carya illinoinensis HOM05D002316 ORTHO05D002280 2.0e-18 97.8 318 31.4
Potri.011G112300 Populus trichocarpa HOM05D002316 ORTHO05D002280 2.0e-18 97.8 217 36.9
Gohir.A13G148550 Gossypium hirsutum HOM05D002316 ORTHO05D002280 3.4e-18 97.1 202 36.6
vmacro11915 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 3.4e-18 97.1 258 35.3
FvH4_3g18610 Fragaria vesca HOM05D002316 ORTHO05D002280 6.4e-17 92.8 236 35.6
Glyma.12G160300 Glycine max HOM05D002316 ORTHO05D002280 1.1e-16 92.0 305 31.5
Potri.001G393700 Populus trichocarpa HOM05D002316 ORTHO05D002280 1.1e-16 92.0 123 44.7
ClCG07G010030 Citrullus lanatus HOM05D002316 ORTHO05D002280 3.2e-16 90.5 250 33.6
Sed0014162 Sechium edule HOM05D002316 ORTHO05D002280 3.2e-16 90.5 250 36.0
Sc03g0010430 Simmondsia chinensis HOM05D002316 ORTHO05D002280 4.1e-16 90.1 238 35.3
MELO3C016104.2 Cucumis melo HOM05D002316 ORTHO05D002280 5.4e-16 89.7 271 33.2
AL1G61670 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 7.0e-16 89.4 236 30.9
Atru.chr2.2212 Acer truncatum HOM05D002316 ORTHO05D002280 9.2e-16 89.0 256 33.2
AT1G53250 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 9.2e-16 89.0 109 45.9
THA.LOC104810445 Tarenaya hassleriana HOM05D002316 ORTHO05D002280 1.2e-15 88.6 187 38.0
QL08p026808 Quercus lobata HOM05D002316 ORTHO05D002280 2.0e-15 87.8 283 33.6
Hund02243 Selenicereus undatus HOM05D002316 ORTHO05D002280 2.0e-15 87.8 239 33.9
VMungo1127G0079 Vigna mungo HOM05D002316 ORTHO05D002280 2.0e-15 87.8 301 30.9
ATR0733G115 Amborella trichopoda HOM05D002316 ORTHO05D002280 2.7e-15 87.4 239 34.3
Eucgr.F03256 Eucalyptus grandis HOM05D002316 ORTHO05D002280 2.7e-15 87.4 213 37.6
Psat7g098680 Pisum sativum HOM05D002316 ORTHO05D002280 2.7e-15 87.4 187 39.6
CsaV3_4G008310 Cucumis sativus L. HOM05D002316 ORTHO05D002280 3.5e-15 87.0 248 32.7
Thhalv10011596m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 3.5e-15 87.0 234 32.1
CSS0043472 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 7.8e-15 85.9 206 36.9
C06p09030 Brassica napus HOM05D002316 ORTHO05D002280 1.0e-14 85.5 223 34.1
C03p91300 Brassica napus HOM05D002316 ORTHO05D002280 1.3e-14 85.1 234 32.9
arahy.Tifrunner.gnm1.ann1.G0VLJ9 Arachis hypogaea HOM05D002316 ORTHO05D002280 1.7e-14 84.7 301 28.6
Lj3g0021485 Lotus japonicus HOM05D002316 ORTHO05D002280 1.7e-14 84.7 270 31.5
arahy.Tifrunner.gnm1.ann1.BKZC9D Arachis hypogaea HOM05D002316 ORTHO05D002280 3.0e-14 84.0 301 28.6
EL10Ac4g08303 Beta vulgaris HOM05D002316 ORTHO05D002280 3.0e-14 84.0 245 32.7
Ciclev10008352m.g Citrus clementina HOM05D002316 ORTHO05D002280 3.0e-14 84.0 160 36.2
Duzib213G0315 Durio zibethinus HOM05D002316 ORTHO05D002280 3.0e-14 84.0 218 35.8
Phvul.011G159500 Phaseolus vulgaris HOM05D002316 ORTHO05D002280 3.0e-14 84.0 300 30.0
Ca_26990_v3 Cicer arietinum L. HOM05D002316 ORTHO05D002280 5.0e-14 83.2 180 40.0
FAN16G1965 Fragaria x ananassa HOM05D002316 ORTHO05D002280 5.0e-14 83.2 244 34.4
BolC6t35981H Brassica oleracea HOM05D002316 ORTHO05D002280 6.6e-14 82.8 284 30.6
BcaC01g01372 Brassica carinata HOM05D002316 ORTHO05D002280 8.6e-14 82.4 234 32.5
Sabra16G0258200 Salix brachista HOM05D002316 ORTHO05D002280 1.1e-13 82.0 237 33.3
CDE03G0166 Ceratophyllum demersum HOM05D002364 ORTHO05D002540 2.5e-13 80.9 102 45.1
Medtr8g464010 Medicago truncatula HOM05D002316 ORTHO05D002280 5.6e-13 79.7 179 36.9
Lalb_Chr19g0133871 Lupinus albus HOM05D002316 ORTHO05D002280 1.2e-12 78.6 267 32.2
HPP92_020167 Vanilla planifolia HOM05D002316 ORTHO05D002280 2.8e-12 77.4 117 43.6
BraA08t32224Z Brassica rapa HOM05D002316 ORTHO05D002280 4.7e-12 76.6 236 32.2
A08p01710 Brassica napus HOM05D002316 ORTHO05D002280 2.3e-11 74.3 237 32.9
A06p01090 Brassica napus HOM05D002316 ORTHO05D002280 3.1e-11 73.9 217 31.3
BraA06t23336Z Brassica rapa HOM05D002316 ORTHO05D002280 3.1e-11 73.9 217 31.3
BcaB04g17097 Brassica carinata HOM05D002316 ORTHO05D002280 4.0e-11 73.6 235 31.5
Hma1.2p1_0607F.1_g188170 Hydrangea macrophylla HOM05D002316 ORTHO05D002280 6.8e-11 72.8 127 37.8
TAR624G0466 Trochodendron aralioides HOM05D002316 ORTHO05D002280 8.9e-11 72.4 86 48.8
CARHR043490 Cardamine hirsuta HOM05D002316 ORTHO05D002280 4.4e-10 70.1 234 29.9
FAN11G1357 Fragaria x ananassa HOM05D002316 ORTHO05D002280 9.8e-10 68.9 88 47.7
Sp1g39830 Schrenkiella parvula HOM05D002316 ORTHO05D002280 1.3e-09 68.6 235 30.2
Aqoxy4G00417 Aquilegia oxysepala HOM05D002316 ORTHO05D002280 2.2e-09 67.8 239 32.2
DCAR_022638 Daucus carota HOM05D002316 ORTHO05D002280 2.9e-09 67.4 136 33.1
Lj3g0022142 Lotus japonicus HOM05D002316 ORTHO05D002280 2.9e-09 67.4 102 40.2
Pp3c20_11380 Physcomitrium patens HOM05D002316 ORTHO05D002280 3.7e-09 67.0 122 36.9
TPR.G11240 Trifolium pratense HOM05D002316 ORTHO05D002280 3.7e-09 67.0 281 28.5
BcaC08g43517 Brassica carinata HOM05D002316 ORTHO05D002280 4.9e-09 66.6 315 27.6
Potri.003G073400 Populus trichocarpa HOM05D002316 ORTHO05D002280 8.3e-09 65.9 136 32.4
BolC3t21445H Brassica oleracea HOM05D002316 ORTHO05D002280 1.4e-08 65.1 268 28.4
FAN25G2366 Fragaria x ananassa HOM05D002316 ORTHO05D002280 3.2e-08 63.9 200 31.5
MELO3C026660.2 Cucumis melo HOM05D002316 ORTHO05D002280 4.1e-08 63.5 129 34.9
SGA_v2.0_scaffold71G23943 Striga asiatica HOM05D002316 ORTHO05D002280 5.4e-08 63.2 135 32.6
Carub.0001s4244 Capsella rubella HOM05D002316 ORTHO05D002280 1.6e-07 61.6 73 43.8
ECA234G4725 Erigeron canadensis HOM05D002316 ORTHO05D002280 2.0e-07 61.2 128 32.8
Mapoly0056s0004 Marchantia polymorpha HOM05D002316 ORTHO05D002280 2.0e-07 61.2 148 31.1
Pp3c23_5090 Physcomitrium patens HOM05D002316 ORTHO05D002280 3.5e-07 60.5 130 33.8
CARHR044090 Cardamine hirsuta HOM05D002316 ORTHO05D002280 6.0e-07 59.7 290 27.6
SalBow6G6393 Salvia bowleyana HOM05D002316 ORTHO05D002280 7.8e-07 59.3 136 28.7
ClCG07G014240 Citrullus lanatus HOM05D002316 ORTHO05D002280 1.3e-06 58.5 129 32.6
Zm00001eb297560 Zea mays HOM05D002316 ORTHO05D002280 2.3e-06 57.8 182 30.8
HanXRQChr10g0311621 Helianthus annuus HOM05D002316 ORTHO05D002280 3.9e-06 57.0 98 34.7
Sp1g40300 Schrenkiella parvula HOM05D002316 ORTHO05D002280 6.6e-06 56.2 274 28.5
Aa31LG10G1510 Aethionema arabicum HOM05D002316 ORTHO05D002280 8.6e-06 55.8 281 28.1
BraA06t23311Z Brassica rapa HOM05D002316 ORTHO05D002280 8.6e-06 55.8 281 25.3
CANSAT56G3763 Cannabis sativa HOM05D002316 ORTHO05D002280 8.6e-06 55.8 136 30.1
Thhalv10011340m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 8.6e-06 55.8 287 27.9


User provided reference genes

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