Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 0.0e+00 1284.2 643 100.0
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 2.4e-220 769.2 636 63.2
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-193 680.6 631 56.7
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 9.1e-167 591.3 650 51.4
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 6.8e-162 575.1 625 51.4
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 8.3e-160 568.2 509 59.1
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 2.3e-157 560.1 530 55.8
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 7.2e-156 555.1 600 52.0
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 4.0e-154 549.3 630 48.9
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 5.2e-154 548.9 626 49.7
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 6.4e-152 542.0 630 48.4
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.8e-151 540.4 632 49.7
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 8.3e-144 515.0 597 47.2
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 1.7e-141 507.3 640 45.0
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 1.4e-138 497.7 605 45.1
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.5e-137 494.2 630 43.8
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 3.2e-135 486.5 638 42.9
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 7.1e-135 485.3 488 55.9
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 1.7e-133 480.7 598 45.3
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 1.8e-130 470.7 559 45.6
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 5.4e-127 459.1 677 41.5
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 7.1e-127 458.8 621 43.2
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 1.6e-126 457.6 619 41.5
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 4.3e-124 449.5 636 41.4
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 1.4e-122 444.5 623 41.3
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 6.8e-122 442.2 633 40.4
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 1.7e-120 437.6 711 38.0
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.9e-116 424.1 612 40.7
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 9.6e-116 421.8 598 40.5
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 4.8e-115 419.5 639 39.3
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 6.2e-115 419.1 632 41.3
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 3.1e-114 416.8 607 42.0
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 3.1e-114 416.8 612 38.6
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 4.9e-112 409.5 626 40.3
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.1e-111 408.3 599 40.1
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 2.4e-111 407.1 567 40.7
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 2.3e-109 400.6 589 38.5
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.9e-108 397.5 638 39.3
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 4.3e-108 396.4 610 38.7
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 7.4e-108 395.6 608 39.1
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 3.6e-107 393.3 605 39.0
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 6.2e-107 392.5 617 39.1
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 1.1e-106 391.7 652 36.8
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 2.4e-106 390.6 569 39.7
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 2.4e-106 390.6 626 38.3
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 3.1e-106 390.2 641 38.1
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 1.5e-105 387.9 630 38.9
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 5.8e-105 386.0 607 37.4
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 9.9e-105 385.2 600 38.5
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 2.9e-104 383.6 561 39.8
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 1.4e-103 381.3 656 37.7
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 3.2e-103 380.2 617 38.1
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 1.2e-102 378.3 625 37.4
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 3.5e-102 376.7 673 36.7
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 6.0e-102 375.9 438 46.1
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 3.9e-101 373.2 640 38.3
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.5e-100 371.3 607 38.4
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 7.4e-100 369.0 625 37.9
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 1.6e-99 367.9 644 38.5
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 3.7e-99 366.7 616 38.1
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.1e-98 365.2 616 38.1
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 9.0e-98 362.1 591 38.6
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 9.0e-98 362.1 623 36.3
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 1.5e-97 361.3 620 36.3
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 4.5e-97 359.8 639 36.5
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 5.8e-97 359.4 623 36.4
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 3.8e-96 356.7 720 34.6
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 2.5e-95 354.0 565 37.2
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 4.6e-94 349.7 625 38.7
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 3.9e-93 346.7 639 36.0
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 7.4e-92 342.4 449 45.7
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.4e-90 337.4 626 36.1
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.0e-88 332.0 616 36.5
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 1.3e-88 331.6 518 38.2
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 5.0e-88 329.7 580 37.9
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.2e-87 326.6 586 37.5
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 9.3e-87 325.5 602 35.0
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 2.4e-82 310.8 640 34.5
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 6.1e-78 296.2 517 37.3
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.0e-77 295.4 548 36.5
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 2.8e-75 287.3 459 38.8
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.4e-74 284.3 623 32.9
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 9.1e-74 282.3 628 32.5
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 1.5e-73 281.6 558 33.7
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-71 275.4 295 52.2
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 3.0e-69 267.3 614 31.1
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 5.7e-68 263.1 628 31.7
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 5.7e-68 263.1 442 37.8
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 1.1e-66 258.8 279 48.0
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 5.9e-65 253.1 621 31.1
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 7.7e-65 252.7 408 35.8
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.0e-64 252.3 625 30.9
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 2.9e-64 250.8 589 31.1
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.5e-63 247.7 489 33.7
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 5.5e-63 246.5 628 30.4
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 2.1e-62 244.6 345 40.0
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 2.7e-62 244.2 614 30.3
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 4.7e-62 243.4 579 31.4
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.8e-61 241.5 255 46.3
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 1.8e-61 241.5 601 30.8
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 1.8e-61 241.5 560 31.1
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.3e-61 241.1 579 30.2
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 3.0e-61 240.7 585 30.6
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 3.0e-61 240.7 585 30.6
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 3.0e-61 240.7 564 31.6
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 2.0e-60 238.0 557 30.2
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 4.4e-60 236.9 619 30.4
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 6.3e-59 233.0 493 31.6
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 9.1e-58 229.2 399 36.8
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.6e-57 228.4 599 30.7
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 1.3e-56 225.3 428 34.3
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 1.9e-55 221.5 217 49.3
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 2.6e-52 211.1 241 45.6
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 5.7e-52 209.9 238 50.0
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 3.7e-51 207.2 282 43.6
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 2.1e-46 191.4 158 58.2
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 4.4e-44 183.7 196 44.4
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 7.5e-44 183.0 444 33.3
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 2.1e-38 164.9 275 36.7
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 3.0e-37 161.0 566 26.5
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 1.2e-36 159.1 501 28.9
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 3.9e-32 144.1 160 46.9
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 8.6e-32 142.9 462 29.4
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 2.5e-31 141.4 576 26.4
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 9.5e-31 139.4 231 36.8
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 1.2e-30 139.0 136 50.7
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 8.0e-30 136.3 152 46.1
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 8.0e-30 136.3 211 38.9
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 4.0e-29 134.0 356 30.9
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.6e-28 131.3 333 33.9
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 3.4e-28 131.0 194 39.2
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 1.7e-24 118.6 450 25.1
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 8.6e-24 116.3 226 35.4
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 3.6e-22 110.9 168 37.5
Oeu029262.1 Olea europaea HOM05D004843 ORTHO05D005833 3.1e-21 107.8 115 53.0
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 5.6e-15 87.0 104 38.5
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 1.4e-13 82.4 471 22.1
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 8.9e-13 79.7 272 25.7
unitig_26.g10043 Utricularia gibba HOM05D004843 ORTHO05D005833 9.9e-12 76.3 110 46.4
Oeu018912.1 Olea europaea HOM05D004843 ORTHO05D005833 3.3e-07 61.2 43 60.5


User provided reference genes

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