Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 2.4e-103 379.0 217 100.0
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 6.0e-38 161.8 166 61.4
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 5.1e-37 158.7 148 60.8
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 3.5e-30 136.0 178 49.4
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 3.5e-30 136.0 178 49.4
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 6.0e-30 135.2 171 50.3
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 2.3e-29 133.3 164 50.6
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 3.0e-29 132.9 162 51.9
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 3.0e-29 132.9 183 48.6
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 8.7e-29 131.3 154 50.0
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 8.7e-29 131.3 110 64.5
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 8.7e-29 131.3 157 50.3
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 1.1e-28 131.0 179 46.9
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.5e-28 130.6 161 49.1
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 1.9e-28 130.2 144 52.8
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 2.5e-28 129.8 183 48.1
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 2.5e-28 129.8 180 47.2
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 3.3e-28 129.4 163 49.7
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 3.3e-28 129.4 159 50.3
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 4.3e-28 129.0 180 42.8
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 4.3e-28 129.0 123 60.2
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 5.7e-28 128.6 151 52.3
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 9.6e-28 127.9 121 57.0
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 9.6e-28 127.9 162 48.1
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 1.3e-27 127.5 160 49.4
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 1.3e-27 127.5 181 43.6
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.6e-27 127.1 180 47.8
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 2.1e-27 126.7 163 47.2
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 2.8e-27 126.3 114 61.4
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 2.8e-27 126.3 163 46.0
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 3.7e-27 125.9 126 55.6
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 4.8e-27 125.6 131 51.9
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 4.8e-27 125.6 158 49.4
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 4.8e-27 125.6 173 48.0
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 6.3e-27 125.2 131 54.2
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 6.3e-27 125.2 157 48.4
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 8.2e-27 124.8 178 45.5
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.1e-26 124.4 171 47.4
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 2.4e-26 123.2 143 52.4
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 2.4e-26 123.2 173 46.2
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 3.1e-26 122.9 156 47.4
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 3.1e-26 122.9 176 44.3
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 4.1e-26 122.5 151 49.7
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 5.3e-26 122.1 176 44.9
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 5.3e-26 122.1 183 45.4
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 6.9e-26 121.7 155 49.0
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 6.9e-26 121.7 155 49.0
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 6.9e-26 121.7 155 49.0
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 6.9e-26 121.7 125 54.4
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 6.9e-26 121.7 160 48.1
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 6.9e-26 121.7 148 52.7
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 6.9e-26 121.7 125 54.4
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 9.0e-26 121.3 144 51.4
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 9.0e-26 121.3 155 49.0
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 9.0e-26 121.3 143 50.3
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 1.2e-25 120.9 155 49.0
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.5e-25 120.6 163 45.4
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.5e-25 120.6 171 44.4
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 2.0e-25 120.2 169 47.9
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 2.6e-25 119.8 165 45.5
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 3.4e-25 119.4 179 43.6
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 3.4e-25 119.4 140 50.0
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 3.4e-25 119.4 154 46.8
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.4e-25 119.4 139 52.5
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.4e-25 119.4 139 52.5
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 3.4e-25 119.4 139 52.5
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 3.4e-25 119.4 159 47.8
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 3.4e-25 119.4 159 47.8
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 4.5e-25 119.0 122 53.3
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 5.9e-25 118.6 161 47.2
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 1.3e-24 117.5 154 46.8
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.3e-24 117.5 107 58.9
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 1.3e-24 117.5 153 50.3
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 1.3e-24 117.5 84 70.2
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 1.7e-24 117.1 167 44.9
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 1.7e-24 117.1 157 45.2
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 2.2e-24 116.7 160 45.0
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.2e-24 116.7 140 50.0
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 2.9e-24 116.3 156 48.1
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 3.8e-24 115.9 157 47.8
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.8e-24 115.9 160 44.4
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 3.8e-24 115.9 184 43.5
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 3.8e-24 115.9 184 43.5
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 6.5e-24 115.2 167 45.5
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 1.1e-23 114.4 157 47.1
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 1.4e-23 114.0 176 42.0
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 1.4e-23 114.0 134 50.0
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 1.9e-23 113.6 151 44.4
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 2.5e-23 113.2 151 46.4
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 2.5e-23 113.2 178 41.0
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 2.5e-23 113.2 159 43.4
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.5e-23 113.2 156 44.9
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 4.2e-23 112.5 161 42.2
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 5.5e-23 112.1 128 49.2
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 3.6e-22 109.4 161 44.7
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 7.9e-22 108.2 103 54.4
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.8e-21 107.1 162 42.0
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 2.3e-21 106.7 127 47.2
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 2.3e-21 106.7 127 47.2
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 3.0e-21 106.3 132 47.0
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 6.7e-21 105.1 167 40.7
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 8.7e-21 104.8 144 41.7
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.5e-20 104.0 176 41.5
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 2.5e-20 103.2 129 49.6
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 1.4e-18 97.4 230 34.8
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 1.8e-18 97.1 110 49.1
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 2.6e-17 93.2 111 48.6
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 2.9e-16 89.7 131 45.0
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 9.4e-15 84.7 119 46.2
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 6.7e-13 78.6 84 46.4
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 7.4e-12 75.1 105 45.7
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 1.3e-11 74.3 123 42.3
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 1.8e-10 70.5 116 39.7
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 5.3e-10 68.9 81 50.6
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.3e-08 64.3 124 37.1
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 7.2e-07 58.5 128 34.4
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 9.4e-07 58.2 115 33.9
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 3.6e-06 56.2 87 43.7
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 7.9e-06 55.1 44 54.5


User provided reference genes

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