Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 3.8e-254 880.9 419 100.0
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.3e-195 685.6 409 77.8
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 4.2e-189 664.8 409 76.8
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.4e-184 649.0 409 72.4
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 5.4e-184 647.9 409 73.3
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.0e-183 646.0 409 73.6
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 7.7e-183 644.0 409 72.4
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.0e-182 643.7 409 72.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 3.8e-182 641.7 397 73.8
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.5e-181 639.0 405 73.3
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 7.2e-181 637.5 409 72.1
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.1e-180 636.0 409 72.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 4.7e-180 634.8 434 70.3
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.1e-180 634.4 409 71.6
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 8.8e-179 630.6 385 75.1
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.6e-178 629.0 392 71.4
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 3.4e-178 628.6 385 74.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 3.4e-178 628.6 406 71.2
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 4.4e-178 628.2 409 71.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 5.7e-178 627.9 406 69.7
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 7.5e-178 627.5 406 70.7
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 9.8e-178 627.1 406 72.2
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.7e-177 626.3 409 71.6
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 6.3e-177 624.4 409 70.4
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.1e-176 622.1 409 70.4
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 3.1e-176 622.1 410 69.8
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 5.4e-176 621.3 399 72.2
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 9.2e-176 620.5 407 68.6
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 9.2e-176 620.5 409 69.4
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 9.2e-176 620.5 409 69.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 3.5e-175 618.6 411 69.1
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 7.8e-175 617.5 385 72.7
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.3e-174 616.7 409 69.9
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.3e-174 616.7 390 72.8
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 2.3e-174 615.9 409 68.5
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 2.3e-174 615.9 409 68.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 2.9e-174 615.5 408 68.9
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.8e-174 615.1 409 68.7
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.5e-173 613.2 385 73.5
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.9e-173 612.8 420 67.6
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.9e-173 612.8 409 68.5
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 4.3e-173 611.7 410 66.6
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 4.3e-173 611.7 409 68.2
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 3.6e-172 608.6 384 72.9
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.6e-172 608.6 389 68.9
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 3.6e-172 608.6 385 71.4
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 8.0e-172 607.4 404 68.6
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.4e-171 606.7 385 70.6
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.8e-171 606.3 409 69.2
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.2e-171 604.7 397 69.5
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 8.9e-171 604.0 409 67.5
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 8.9e-171 604.0 409 67.2
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.0e-170 602.8 409 68.7
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 2.0e-170 602.8 409 68.9
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 2.0e-170 602.8 404 68.6
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 2.6e-170 602.4 404 68.3
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 4.4e-170 601.7 409 68.9
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 7.5e-170 600.9 409 68.2
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 9.8e-170 600.5 410 68.5
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.3e-169 600.1 409 68.5
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 3.7e-169 598.6 409 68.7
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 6.4e-169 597.8 409 68.5
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 8.3e-169 597.4 409 69.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.1e-168 597.0 408 67.4
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.8e-168 596.3 409 68.2
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 5.9e-167 591.3 409 68.0
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 5.9e-167 591.3 409 68.9
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 3.0e-166 589.0 409 68.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 8.6e-166 587.4 408 66.7
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.5e-165 586.6 382 70.4
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.5e-165 586.6 386 70.2
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 2.5e-165 585.9 408 64.2
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.0e-163 580.5 404 67.1
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.4e-163 580.1 406 66.7
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 5.2e-163 578.2 410 66.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.7e-161 573.2 408 64.0
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.7e-161 572.0 409 65.0
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 4.1e-160 568.5 421 64.4
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.6e-158 560.8 397 65.7
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 7.3e-157 557.8 408 61.8
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-154 550.1 521 53.0
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.0e-154 549.7 450 61.3
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 5.8e-154 548.1 417 63.1
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.7e-153 546.6 378 67.2
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 6.4e-153 544.7 385 64.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 6.6e-150 534.6 454 59.0
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.5e-149 533.5 411 61.8
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.1e-147 527.3 354 67.8
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.3e-147 526.2 412 61.4
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 6.8e-147 524.6 421 59.6
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 2.8e-140 502.7 316 73.4
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 2.6e-138 496.1 316 71.2
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 3.4e-122 442.6 362 60.5
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.6e-116 423.7 409 54.8
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 3.0e-94 349.7 348 43.7
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 3.6e-87 326.2 200 72.5
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 6.1e-87 325.5 358 43.9
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 2.2e-84 317.0 351 40.7
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 8.2e-84 315.1 202 71.8
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 5.3e-83 312.4 196 71.9
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.1e-71 273.9 349 35.8
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.5e-56 224.6 280 36.4
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 8.0e-47 192.2 106 79.2
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.2e-36 157.5 103 68.0
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 9.2e-35 152.1 114 63.2
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 9.2e-35 152.1 114 63.2
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 4.6e-34 149.8 103 66.0
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 7.3e-32 142.5 144 54.2
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.6e-31 141.4 85 72.9
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.4e-11 75.1 49 65.3
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.2e-11 73.9 49 63.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.2e-11 73.6 50 62.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.5e-08 65.1 48 58.3
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.5e-08 65.1 45 64.4
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 8.1e-07 59.3 63 46.0


User provided reference genes

Program Settings