Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23631 Striga asiatica HOM05D007374 ORTHO05D009283 1.5e-131 473.0 270 100.0
Migut.M00488 Erythranthe guttata HOM05D007374 ORTHO05D009283 1.2e-72 277.3 276 61.6
MSTRG.15040 Avicennia marina HOM05D007374 ORTHO05D009283 5.7e-62 241.9 280 55.7
PGSC0003DMG400021285 Solanum tuberosum HOM05D007374 ORTHO05D009283 7.5e-54 214.9 253 52.2
Sopen10g003640 Solanum pennellii HOM05D007374 ORTHO05D009283 9.8e-54 214.5 273 49.5
Solyc10g007730.3 Solanum lycopersicum HOM05D007374 ORTHO05D009283 2.4e-52 209.9 273 49.1
CAN.G2018.2 Capsicum annuum HOM05D007374 ORTHO05D009283 5.4e-52 208.8 282 47.9
Nitab4.5_0002209g0060 Nicotiana tabacum HOM05D007374 ORTHO05D009283 2.2e-50 203.4 275 49.8
QL08p044444 Quercus lobata HOM05D007374 ORTHO05D009283 2.2e-50 203.4 278 47.8
Cc05_g09580 Coffea canephora HOM05D007374 ORTHO05D009283 8.5e-50 201.4 269 49.1
Rhsim12G0085200 Rhododendron simsii HOM05D007374 ORTHO05D009283 4.2e-49 199.1 271 46.5
Cfa021554 Carpinus fangiana HOM05D007374 ORTHO05D009283 5.5e-49 198.7 280 46.1
TAR627G0951 Trochodendron aralioides HOM05D007374 ORTHO05D009283 1.6e-48 197.2 284 48.6
Gorai.012G040800 Gossypium raimondii HOM05D007374 ORTHO05D009283 2.3e-47 193.4 262 50.0
Gohir.A05G379500 Gossypium hirsutum HOM05D007374 ORTHO05D009283 8.8e-47 191.4 280 48.6
vmacro01388 Vaccinium macrocarpon HOM05D007374 ORTHO05D009283 8.8e-47 191.4 276 46.0
Gohir.D04G035900 Gossypium hirsutum HOM05D007374 ORTHO05D009283 1.5e-46 190.7 262 49.2
MD17G1138200 Malus domestica HOM05D007374 ORTHO05D009283 1.3e-45 187.6 261 47.1
Eucgr.A01989 Eucalyptus grandis HOM05D007374 ORTHO05D009283 3.7e-45 186.0 274 45.3
Oeu005608.1 Olea europaea HOM05D007374 ORTHO05D009283 3.7e-45 186.0 235 50.2
Ciclev10032166m.g Citrus clementina HOM05D007374 ORTHO05D009283 1.8e-44 183.7 251 47.4
CiPaw.03G190900 Carya illinoinensis HOM05D007374 ORTHO05D009283 2.4e-44 183.3 276 46.4
LjContig00049g0002262 Lotus japonicus HOM05D007374 ORTHO05D009283 2.4e-44 183.3 287 43.9
ECA234G2656 Erigeron canadensis HOM05D000461 ORTHO05D001840 3.1e-44 183.0 268 45.1
Thhalv10009532m.g Eutrema salsugineum HOM05D007374 ORTHO05D009283 3.1e-44 183.0 249 47.0
Glyma.02G285800 Glycine max HOM05D007374 ORTHO05D009283 3.1e-44 183.0 288 44.1
Lsat_1_v5_gn_4_26980 Lactuca sativa HOM05D007374 ORTHO05D009283 5.4e-44 182.2 257 46.7
Nn4g26487 Nelumbo nucifera HOM05D007374 ORTHO05D009283 5.4e-44 182.2 264 47.7
COL.COLO4_00303 Corchorus olitorius HOM05D007374 ORTHO05D009283 7.0e-44 181.8 280 46.1
Sp1g05270 Schrenkiella parvula HOM05D007374 ORTHO05D009283 7.0e-44 181.8 248 45.2
Atru.chr6.2078 Acer truncatum HOM05D007374 ORTHO05D009283 1.6e-43 180.6 263 44.9
Peaxi162Scf00035g00262 Petunia axillaris HOM05D007374 ORTHO05D009283 1.6e-43 180.6 297 46.1
GSVIVG01020866001 Vitis vinifera HOM05D007374 ORTHO05D009283 1.6e-43 180.6 258 46.9
BcaB02g06801 Brassica carinata HOM05D007374 ORTHO05D009283 2.0e-43 180.3 245 48.6
A10p05160 Brassica napus HOM05D007374 ORTHO05D009283 2.0e-43 180.3 242 48.3
BraA10t42783Z Brassica rapa HOM05D007374 ORTHO05D009283 2.7e-43 179.9 242 48.3
Prupe.3G174200 Prunus persica HOM05D007374 ORTHO05D009283 2.7e-43 179.9 284 42.6
BolC5t29248H Brassica oleracea HOM05D007374 ORTHO05D009283 4.5e-43 179.1 240 47.5
FvH4_6g38360 Fragaria vesca HOM05D007374 ORTHO05D009283 4.5e-43 179.1 281 43.4
FAN14G0493 Fragaria x ananassa HOM05D007374 ORTHO05D009283 4.5e-43 179.1 281 43.8
Hund08257 Selenicereus undatus HOM05D007374 ORTHO05D009283 5.9e-43 178.7 254 46.9
Dinv02438 Davidia involucrata HOM05D007374 ORTHO05D009283 1.3e-42 177.6 261 46.4
Thecc.01G163300 Theobroma cacao HOM05D007374 ORTHO05D009283 1.3e-42 177.6 271 46.1
Sed0010749 Sechium edule HOM05D007374 ORTHO05D009283 2.9e-42 176.4 270 46.3
RcHm_v2.0_Chr2g0151671 Rosa chinensis HOM05D007374 ORTHO05D009283 3.8e-42 176.0 274 43.8
C05p04770 Brassica napus HOM05D007374 ORTHO05D009283 5.0e-42 175.6 246 45.5
arahy.Tifrunner.gnm1.ann1.PL1TQM Arachis hypogaea HOM05D007374 ORTHO05D009283 6.6e-42 175.3 241 46.9
Medtr5g091560 Medicago truncatula HOM05D007374 ORTHO05D009283 6.6e-42 175.3 264 43.9
Carub.0001s0588 Capsella rubella HOM05D007374 ORTHO05D009283 1.9e-41 173.7 245 45.3
Glyma.14G028800 Glycine max HOM05D007374 ORTHO05D009283 3.3e-41 172.9 254 44.1
AL1G16540 Arabidopsis lyrata HOM05D007374 ORTHO05D009283 5.6e-41 172.2 249 45.8
AT1G06510 Arabidopsis thaliana HOM05D007374 ORTHO05D009283 3.6e-40 169.5 245 48.6
CsaV3_7G022640 Cucumis sativus L. HOM05D007374 ORTHO05D009283 6.1e-40 168.7 279 41.6
ClCG09G022490 Citrullus lanatus HOM05D007374 ORTHO05D009283 8.0e-40 168.3 278 42.8
Phvul.008G231728 Phaseolus vulgaris HOM05D007374 ORTHO05D009283 8.0e-40 168.3 252 45.2
arahy.Tifrunner.gnm1.ann1.G50Y2D Arachis hypogaea HOM05D007374 ORTHO05D009283 1.0e-39 167.9 240 46.2
HanXRQChr01g0028771 Helianthus annuus HOM05D007374 ORTHO05D009283 1.8e-39 167.2 252 42.9
Psat2g016160 Pisum sativum HOM05D007374 ORTHO05D009283 2.3e-39 166.8 291 41.6
VMungo0647G1819 Vigna mungo HOM05D007374 ORTHO05D009283 2.3e-39 166.8 247 44.1
MELO3C012638.2 Cucumis melo HOM05D007374 ORTHO05D009283 4.0e-39 166.0 278 42.1
AUR62017602 Chenopodium quinoa HOM05D007374 ORTHO05D009283 5.2e-39 165.6 254 44.9
PGR042G1022 Punica granatum HOM05D007374 ORTHO05D009283 6.8e-39 165.2 276 43.1
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 4.4e-38 162.5 263 41.1
Lalb_Chr10g0106631 Lupinus albus HOM05D007374 ORTHO05D009283 5.7e-38 162.2 263 43.7
TPR.G12560 Trifolium pratense HOM05D007374 ORTHO05D009283 5.7e-38 162.2 253 41.9
Aqoxy4G00135 Aquilegia oxysepala HOM05D007374 ORTHO05D009283 1.3e-37 161.0 282 40.4
Sabra05G0154300 Salix brachista HOM05D007374 ORTHO05D009283 1.7e-37 160.6 256 44.9
Lj1A605T43 Lonicera japonica HOM05D007374 ORTHO05D009283 2.9e-37 159.8 231 45.5
AUR62015143 Chenopodium quinoa HOM05D007374 ORTHO05D009283 3.7e-37 159.5 254 44.5
FAN05G2216 Fragaria x ananassa HOM05D007374 ORTHO05D009283 8.3e-37 158.3 326 37.7
FAN09G2358 Fragaria x ananassa HOM05D007374 ORTHO05D009283 8.3e-37 158.3 326 38.0
Cpa.g.sc1195.1 Carica papaya HOM05D007374 ORTHO05D009283 1.4e-36 157.5 285 42.5
Haze_13514 Corylus avellana HOM05D007374 ORTHO05D009283 1.2e-35 154.5 226 43.4
SalBow8G1446 Salvia bowleyana HOM05D007374 ORTHO05D009283 2.0e-35 153.7 119 74.8
unitig_746.g26685 Utricularia gibba HOM05D002434 ORTHO05D002743 2.0e-35 153.7 204 51.0
FAN02G3372 Fragaria x ananassa HOM05D007374 ORTHO05D009283 1.0e-34 151.4 321 37.7
Nitab4.5_0003104g0030 Nicotiana tabacum HOM05D007374 ORTHO05D009283 1.3e-34 151.0 161 59.0
Potri.005G203100 Populus trichocarpa HOM05D007374 ORTHO05D009283 1.3e-34 151.0 256 44.5
Ah.01g013460 Amaranthus hybridus HOM05D007374 ORTHO05D009283 3.9e-34 149.4 259 43.2
CDE02G0809 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 5.0e-34 149.1 271 39.5
EL10Ac9g22854 Beta vulgaris HOM05D007374 ORTHO05D009283 1.9e-33 147.1 267 41.6
BcaC04g23554 Brassica carinata HOM05D007374 ORTHO05D009283 3.3e-33 146.4 248 42.3
Aa31LG1G7610 Aethionema arabicum HOM05D007374 ORTHO05D009283 7.3e-33 145.2 233 42.9
Ca_30616_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 8.0e-32 141.7 229 41.5
HPP92_024591 Vanilla planifolia HOM05D007374 ORTHO05D009283 2.0e-30 137.1 238 40.8
QL08p044527 Quercus lobata HOM05D007374 ORTHO05D009283 8.3e-29 131.7 112 68.8
HPP92_024519 Vanilla planifolia HOM05D007374 ORTHO05D009283 7.0e-28 128.6 256 37.9
LjContig00141g0020215 Lotus japonicus HOM05D007374 ORTHO05D009283 2.3e-26 123.6 248 36.7
Actinidia00867 Actinidia chinensis HOM05D007374 ORTHO05D009283 3.9e-26 122.9 98 72.4
Zm00001eb155870 Zea mays HOM05D007374 ORTHO05D009283 1.2e-24 117.9 254 34.3
MD09G1150800 Malus domestica HOM05D007374 ORTHO05D009283 3.1e-23 113.2 143 53.8
Os01g0696000 Oryza sativa ssp. japonica HOM05D007374 ORTHO05D009283 3.1e-23 113.2 251 33.9
CDE09G1208 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 1.2e-22 111.3 258 34.1
Ca_06277_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 3.4e-22 109.8 206 37.4
HanXRQChr17g0565851 Helianthus annuus HOM05D007374 ORTHO05D009283 2.2e-21 107.1 118 54.2
Hma1.2p1_0081F.1_g042230 Hydrangea macrophylla HOM05D007374 ORTHO05D009283 6.6e-18 95.5 76 73.7
Pp3c6_23840 Physcomitrium patens HOM05D007374 ORTHO05D009283 1.2e-16 91.3 112 48.2
Sc06g0007570 Simmondsia chinensis HOM05D007374 ORTHO05D009283 7.6e-14 82.0 185 33.0
CBR_g17125 Chara braunii HOM05D007374 ORTHO05D009283 5.6e-09 65.9 97 40.2
CARHR006130 Cardamine hirsuta HOM05D007374 ORTHO05D009283 9.6e-09 65.1 154 29.9
Mapoly0086s0079 Marchantia polymorpha HOM05D007374 ORTHO05D009283 3.6e-08 63.2 102 40.2


User provided reference genes

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