Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 1.8e-99 365.9 181 100.0
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 5.5e-69 264.6 169 78.1
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 1.3e-62 243.4 169 71.6
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 7.2e-61 237.7 171 69.0
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 6.7e-59 231.1 169 68.6
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 8.8e-59 230.7 158 70.9
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.5e-58 229.9 166 69.3
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 2.6e-58 229.2 175 68.0
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 3.3e-58 228.8 169 65.1
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 5.7e-58 228.0 169 67.5
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.3e-57 226.9 169 65.1
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.2e-57 226.1 171 67.3
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 2.8e-57 225.7 171 67.3
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 3.7e-57 225.3 170 65.9
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 4.8e-57 224.9 165 69.1
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.4e-56 223.4 171 62.6
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 1.4e-56 223.4 168 64.9
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 1.4e-56 223.4 169 66.3
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 2.4e-56 222.6 168 63.7
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 2.4e-56 222.6 160 68.8
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 3.1e-56 222.2 169 66.3
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 4.1e-56 221.9 171 65.5
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 4.1e-56 221.9 171 65.5
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 4.1e-56 221.9 169 66.3
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 4.1e-56 221.9 171 65.5
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 4.1e-56 221.9 169 63.3
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 5.3e-56 221.5 169 65.1
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 5.3e-56 221.5 170 62.4
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 7.0e-56 221.1 171 66.1
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 9.1e-56 220.7 168 66.7
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.2e-55 220.3 168 63.1
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.2e-55 220.3 168 63.7
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 1.2e-55 220.3 171 66.7
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.6e-55 219.9 165 64.8
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.6e-55 219.9 166 68.1
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 4.5e-55 218.4 160 67.5
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 1.0e-54 217.2 158 69.6
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 1.0e-54 217.2 165 64.2
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 1.0e-54 217.2 168 64.9
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 1.0e-54 217.2 169 62.1
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.3e-54 216.9 168 62.5
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 1.7e-54 216.5 165 64.2
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.7e-54 216.5 168 62.5
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 1.7e-54 216.5 169 63.9
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 3.8e-54 215.3 165 63.6
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 3.8e-54 215.3 165 63.0
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.5e-54 214.5 171 61.4
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 1.1e-53 213.8 158 69.0
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 1.5e-53 213.4 165 66.7
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 3.2e-53 212.2 170 62.4
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 7.2e-53 211.1 171 63.7
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 7.2e-53 211.1 156 68.6
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 7.2e-53 211.1 168 63.1
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 1.2e-52 210.3 170 63.5
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 2.1e-52 209.5 185 59.5
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 2.1e-52 209.5 170 63.5
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 2.7e-52 209.1 175 61.1
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 6.1e-52 208.0 159 66.7
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 3.0e-51 205.7 165 62.4
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 5.2e-51 204.9 175 59.4
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 6.8e-51 204.5 165 61.8
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 8.8e-51 204.1 170 60.0
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 1.5e-50 203.4 156 63.5
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 5.7e-50 201.4 171 58.5
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 5.7e-50 201.4 171 58.5
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 5.7e-50 201.4 171 58.5
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 5.7e-50 201.4 166 61.4
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.3e-49 200.3 175 57.1
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 2.2e-49 199.5 175 56.6
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.2e-49 199.5 171 56.7
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 1.1e-48 197.2 172 58.7
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.4e-48 196.8 163 61.3
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 2.4e-48 196.1 172 55.8
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 4.1e-48 195.3 171 55.6
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 4.1e-48 195.3 175 54.9
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 5.4e-48 194.9 171 55.6
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 5.4e-48 194.9 157 59.9
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 7.0e-48 194.5 160 60.0
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 9.1e-48 194.1 155 61.9
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 4.5e-47 191.8 170 54.7
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 2.3e-46 189.5 175 54.3
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.9e-45 186.4 168 54.2
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 1.9e-45 186.4 177 54.2
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 2.5e-45 186.0 175 52.6
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 4.7e-44 181.8 175 51.4
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 3.0e-43 179.1 138 65.9
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 6.8e-43 177.9 130 65.4
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 8.9e-43 177.6 187 52.4
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 2.6e-42 176.0 187 51.9
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 2.2e-41 172.9 199 46.7
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 1.2e-39 167.2 137 60.6
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 3.9e-38 162.2 143 57.3
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 3.9e-38 162.2 133 58.6
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.9e-37 159.8 174 47.7
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 3.3e-37 159.1 132 59.8
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 4.3e-37 158.7 123 65.0
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 5.6e-37 158.3 131 59.5
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 2.8e-36 156.0 180 46.1
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 3.1e-35 152.5 131 58.0
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 8.3e-33 144.4 156 48.7
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 1.1e-32 144.1 191 41.4
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 9.2e-32 141.0 104 71.2
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.2e-28 130.6 92 66.3
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 2.9e-25 119.4 141 46.1
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 4.9e-25 118.6 170 38.8
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 4.6e-23 112.1 152 41.4
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 2.3e-22 109.8 173 38.7
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 6.6e-22 108.2 169 39.1
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 6.4e-17 91.7 153 37.9
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.1e-16 90.9 170 35.9
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 4.1e-16 89.0 183 36.6
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 5.4e-16 88.6 102 47.1
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 1.2e-15 87.4 132 40.2
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 1.6e-12 77.0 48 72.9


User provided reference genes

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