Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 2.4e-114 415.6 227 100.0
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 3.0e-64 249.2 234 67.5
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 2.2e-54 216.5 238 59.2
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 1.4e-50 203.8 238 58.8
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 2.7e-41 172.9 239 50.2
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 3.6e-41 172.6 221 50.2
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 8.0e-41 171.4 212 54.2
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 8.0e-41 171.4 249 45.8
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 2.3e-40 169.9 232 49.1
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 3.0e-40 169.5 226 50.0
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 8.8e-40 167.9 234 46.2
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.5e-39 167.2 234 45.7
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.5e-39 167.2 234 45.7
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 1.5e-39 167.2 234 45.7
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.5e-39 167.2 230 48.7
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.6e-39 166.4 229 48.5
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.6e-39 166.4 227 50.7
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 9.7e-39 164.5 256 49.2
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 9.7e-39 164.5 229 50.2
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 2.8e-38 162.9 232 48.7
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 3.7e-38 162.5 233 47.2
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 4.8e-38 162.2 246 45.5
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 4.8e-38 162.2 234 52.1
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 6.3e-38 161.8 228 49.6
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.4e-37 160.6 221 49.3
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 1.8e-37 160.2 237 44.7
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.4e-37 159.8 221 48.4
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 3.1e-37 159.5 200 51.5
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 4.1e-37 159.1 223 48.4
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 5.3e-37 158.7 228 45.6
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 5.3e-37 158.7 254 44.1
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 7.0e-37 158.3 245 42.4
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 9.1e-37 157.9 276 42.4
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 1.2e-36 157.5 226 49.6
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 2.6e-36 156.4 239 49.0
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 1.7e-35 153.7 243 47.3
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 2.2e-35 153.3 243 45.3
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.9e-35 152.9 232 48.7
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 3.8e-35 152.5 223 48.0
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 5.0e-35 152.1 244 48.4
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 5.0e-35 152.1 261 46.0
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 5.0e-35 152.1 228 46.1
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 8.5e-35 151.4 216 44.4
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.5e-34 149.8 264 45.5
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.2e-34 149.1 186 54.8
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 5.5e-34 148.7 232 46.1
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 1.6e-33 147.1 253 44.7
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 1.6e-33 147.1 230 46.5
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.7e-33 146.4 233 48.1
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 6.1e-33 145.2 238 47.5
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.0e-32 144.4 224 47.3
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 1.4e-32 144.1 232 44.8
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 1.4e-32 144.1 225 45.3
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 2.3e-32 143.3 230 45.7
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 5.2e-32 142.1 239 45.6
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.5e-31 140.6 228 42.5
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 1.5e-31 140.6 235 45.1
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 2.6e-31 139.8 241 43.2
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 3.4e-31 139.4 232 46.6
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 4.4e-31 139.0 221 45.7
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 5.7e-31 138.7 234 47.4
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 5.7e-31 138.7 234 43.6
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 7.5e-31 138.3 222 41.9
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 1.3e-30 137.5 216 43.1
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.3e-30 137.5 234 43.2
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 1.7e-30 137.1 225 43.1
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.7e-30 137.1 170 51.8
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.2e-30 136.7 225 46.7
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 2.8e-30 136.3 245 43.7
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 2.8e-30 136.3 161 55.9
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 4.8e-30 135.6 238 40.3
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 4.8e-30 135.6 227 42.3
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 6.3e-30 135.2 221 44.3
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 6.3e-30 135.2 84 71.4
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 8.3e-30 134.8 221 48.0
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.1e-29 134.4 252 42.9
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 3.1e-29 132.9 221 41.6
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 3.1e-29 132.9 221 41.6
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 7.0e-29 131.7 151 53.6
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 1.2e-28 131.0 227 45.4
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 1.6e-28 130.6 233 46.4
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 2.0e-28 130.2 232 44.4
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.0e-28 130.2 177 44.6
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.0e-28 130.2 221 44.8
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 2.7e-28 129.8 222 43.2
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 3.5e-28 129.4 219 42.0
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 3.5e-28 129.4 220 41.4
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 3.5e-28 129.4 274 41.2
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 4.5e-28 129.0 204 47.1
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 5.9e-28 128.6 259 42.9
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 5.9e-28 128.6 259 42.9
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 5.9e-28 128.6 236 41.9
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.3e-27 127.5 244 41.8
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.3e-27 127.5 221 41.2
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.7e-27 127.1 224 42.9
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 1.7e-27 127.1 219 40.2
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 2.9e-27 126.3 150 53.3
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 3.8e-27 125.9 227 43.2
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 5.0e-27 125.6 230 44.8
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 5.0e-27 125.6 237 42.6
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 6.5e-27 125.2 219 40.6
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.5e-26 124.0 222 41.9
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 1.5e-26 124.0 220 40.0
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.5e-26 123.2 235 39.1
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 3.2e-26 122.9 225 39.6
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 5.5e-26 122.1 240 42.5
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 7.2e-26 121.7 262 43.1
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 9.4e-26 121.3 83 67.5
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 1.2e-25 120.9 232 42.7
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 2.7e-25 119.8 259 43.2
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 3.6e-25 119.4 220 40.0
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 3.6e-25 119.4 154 50.0
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 1.4e-24 117.5 222 40.5
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 5.2e-24 115.5 219 40.6
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 5.2e-24 115.5 219 40.6
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 8.8e-24 114.8 223 40.4
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 1.5e-23 114.0 227 41.4
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 3.4e-23 112.8 219 38.4
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 5.7e-23 112.1 219 37.9
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 1.3e-22 110.9 217 37.8
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 2.2e-22 110.2 219 37.4
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 2.8e-22 109.8 220 40.9
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 6.3e-22 108.6 85 61.2
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 1.4e-21 107.5 219 38.8
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 1.4e-21 107.5 219 38.8
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 1.4e-21 107.5 140 42.9
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 3.1e-21 106.3 97 55.7
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 4.1e-21 105.9 181 40.9
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 4.1e-21 105.9 226 37.6
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 1.2e-20 104.4 219 37.4
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 2.7e-20 103.2 243 34.2
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 3.5e-20 102.8 110 56.4
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 1.7e-19 100.5 77 61.0
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 5.6e-18 95.5 254 37.8
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 7.2e-18 95.1 259 37.8
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 3.6e-17 92.8 221 40.3
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.0e-16 91.3 166 40.4
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 6.8e-16 88.6 104 43.3
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 6.8e-16 88.6 112 42.0
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 1.2e-15 87.8 162 39.5
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.5e-15 87.4 119 44.5
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 1.8e-13 80.5 217 32.7
SalBow4G0268 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.2e-12 77.8 112 50.0
MSTRG.14327 Avicennia marina HOM05D004801 ORTHO05D005747 3.4e-07 59.7 149 45.0


User provided reference genes

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