Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23471 Striga asiatica HOM05D007748 ORTHO05D009345 4.3e-138 495.0 314 100.0
Manes.13G151000 Manihot esculenta HOM05D007748 ORTHO05D009345 2.4e-11 73.9 170 32.4
Phvul.011G112100 Phaseolus vulgaris HOM05D007748 ORTHO05D009345 5.9e-10 69.3 214 32.2
CiPaw.03G170600 Carya illinoinensis HOM05D007748 ORTHO05D009345 1.0e-09 68.6 171 33.3
arahy.Tifrunner.gnm1.ann1.SX3Q91 Arachis hypogaea HOM05D007748 ORTHO05D009345 2.9e-09 67.0 147 32.0
arahy.Tifrunner.gnm1.ann1.5P5A6I Arachis hypogaea HOM05D007748 ORTHO05D009345 3.8e-09 66.6 147 31.3
Hma1.2p1_0565F.1_g179400 Hydrangea macrophylla HOM05D007748 ORTHO05D009345 3.8e-09 66.6 259 29.7
FAN09G1549 Fragaria x ananassa HOM05D007748 ORTHO05D009345 5.0e-09 66.2 297 24.6
VMungo1127G2014 Vigna mungo HOM05D007748 ORTHO05D009345 5.0e-09 66.2 296 29.1
ECA246G0851 Erigeron canadensis HOM05D007748 ORTHO05D009345 8.5e-09 65.5 170 32.9
HanXRQChr15g0480361 Helianthus annuus HOM05D007748 ORTHO05D009345 8.5e-09 65.5 149 34.2
Cfa014551 Carpinus fangiana HOM05D007748 ORTHO05D009345 1.1e-08 65.1 78 48.7
Lalb_Chr19g0135431 Lupinus albus HOM05D007748 ORTHO05D009345 1.5e-08 64.7 126 32.5
Ca_20695_v3 Cicer arietinum L. HOM05D007748 ORTHO05D009345 2.5e-08 63.9 166 31.3
FAN14G2142 Fragaria x ananassa HOM05D007748 ORTHO05D009345 4.2e-08 63.2 291 25.8
Nn1g03923 Nelumbo nucifera HOM05D007748 ORTHO05D009345 4.2e-08 63.2 146 32.2
arahy.Tifrunner.gnm1.ann1.MF6V35 Arachis hypogaea HOM05D007748 ORTHO05D009345 5.5e-08 62.8 223 29.1
PSO675G9319 Papaver somniferum HOM05D007748 ORTHO05D009345 5.5e-08 62.8 167 29.3
PGR142G3499 Punica granatum HOM05D007748 ORTHO05D009345 5.5e-08 62.8 237 33.3
RcHm_v2.0_Chr2g0162021 Rosa chinensis HOM05D007748 ORTHO05D009345 7.2e-08 62.4 266 26.7
FAN05G3025 Fragaria x ananassa HOM05D007748 ORTHO05D009345 1.6e-07 61.2 275 26.2
Lsat_1_v5_gn_3_39541 Lactuca sativa HOM05D007748 ORTHO05D009345 1.6e-07 61.2 153 34.0
Psat7g197200 Pisum sativum HOM05D007748 ORTHO05D009345 1.6e-07 61.2 162 29.0
QL08p037531 Quercus lobata HOM05D007748 ORTHO05D009345 1.6e-07 61.2 79 41.8
Eucgr.K00931 Eucalyptus grandis HOM05D007748 ORTHO05D009345 2.1e-07 60.8 159 27.0
FvH4_6g44840 Fragaria vesca HOM05D007748 ORTHO05D009345 2.7e-07 60.5 283 25.4
Glyma.12G107600 Glycine max HOM05D007748 ORTHO05D009345 4.7e-07 59.7 211 31.3
PSO541G5470 Papaver somniferum HOM05D007748 ORTHO05D009345 4.7e-07 59.7 169 27.8
Atru.chr6.3057 Acer truncatum HOM05D007748 ORTHO05D009345 8.0e-07 58.9 253 28.5
Migut.M00300 Erythranthe guttata HOM05D007748 ORTHO05D009345 8.0e-07 58.9 311 29.9
Glyma.06G297400 Glycine max HOM05D007748 ORTHO05D009345 8.0e-07 58.9 75 46.7
Lalb_Chr03g0029211 Lupinus albus HOM05D007748 ORTHO05D009345 1.4e-06 58.2 75 44.0
PGR142G1582 Punica granatum HOM05D007748 ORTHO05D009345 1.4e-06 58.2 162 30.2
COL.COLO4_13689 Corchorus olitorius HOM05D007748 ORTHO05D009345 1.8e-06 57.8 80 38.8
Nitab4.5_0005244g0030 Nicotiana tabacum HOM05D012354 ORTHO05D009345 1.8e-06 57.8 283 29.7
TWI18G1232 Tripterygium wilfordii HOM05D007748 ORTHO05D009345 1.8e-06 57.8 61 49.2
Lj3g0024600 Lotus japonicus HOM05D007748 ORTHO05D009345 2.3e-06 57.4 57 52.6
Medtr4g046037 Medicago truncatula HOM05D007748 ORTHO05D009345 2.3e-06 57.4 147 28.6
Solyc12g005560.1 Solanum lycopersicum HOM05D012354 ORTHO05D009345 4.0e-06 56.6 109 40.4
Potri.019G109200 Populus trichocarpa HOM05D007748 ORTHO05D009345 6.7e-06 55.8 60 45.0
Aqoxy1G02767 Aquilegia oxysepala HOM05D007748 ORTHO05D009345 8.8e-06 55.5 145 29.7


User provided reference genes

Program Settings