Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 2.6e-195 685.3 355 100.0
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 5.7e-110 401.7 401 57.6
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.1e-108 397.5 355 60.3
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.8e-108 396.7 359 61.6
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.6e-96 357.1 355 54.1
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 4.8e-93 345.5 365 52.9
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 5.3e-92 342.0 284 59.2
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.7e-90 337.0 366 53.0
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 5.0e-90 335.5 292 58.2
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 5.0e-90 335.5 256 64.8
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.2e-89 332.8 291 57.7
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.2e-89 332.8 290 60.3
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 3.2e-89 332.8 256 65.2
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 3.2e-89 332.8 361 52.1
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 5.5e-89 332.0 361 52.4
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 9.4e-89 331.3 366 52.7
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 8.0e-88 328.2 360 51.1
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.8e-87 327.0 361 51.2
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.3e-87 326.6 355 51.5
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.3e-87 326.6 366 52.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.1e-86 324.3 353 51.6
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.7e-85 320.5 285 58.2
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.7e-85 319.3 334 53.3
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 8.2e-85 318.2 274 58.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.4e-84 317.4 353 51.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 3.1e-84 316.2 280 58.6
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 4.1e-84 315.8 283 57.6
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 5.3e-84 315.5 283 56.5
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 9.1e-84 314.7 287 56.1
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.2e-83 314.3 273 58.6
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 2.6e-83 313.2 287 56.1
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 2.6e-83 313.2 341 50.1
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 3.5e-83 312.8 268 60.1
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 7.7e-83 311.6 355 50.7
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.3e-82 310.8 334 52.4
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.9e-82 309.7 272 59.6
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 2.9e-82 309.7 367 48.2
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 3.8e-82 309.3 266 59.0
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 5.0e-82 308.9 272 59.6
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.1e-81 307.8 361 49.6
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.1e-81 307.8 283 56.9
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.5e-81 307.4 333 49.5
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 2.5e-81 306.6 296 53.0
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.5e-81 305.4 283 54.8
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 5.5e-81 305.4 333 48.9
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 7.2e-81 305.1 347 49.9
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 9.4e-81 304.7 356 49.4
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 2.1e-80 303.5 316 51.9
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.1e-80 303.5 256 57.8
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 2.7e-80 303.1 333 52.3
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 3.6e-80 302.8 272 56.2
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 3.6e-80 302.8 347 49.0
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 4.7e-80 302.4 319 52.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 4.7e-80 302.4 354 47.5
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 4.7e-80 302.4 356 49.4
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.7e-80 302.4 340 51.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 1.4e-79 300.8 343 49.6
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.8e-79 300.4 319 48.9
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 3.0e-79 299.7 297 53.2
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 5.2e-79 298.9 289 54.7
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.5e-78 297.4 307 51.8
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 3.4e-78 296.2 274 55.1
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 5.7e-78 295.4 301 51.5
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.5e-78 295.0 316 50.9
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 9.7e-78 294.7 350 47.4
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 9.7e-78 294.7 350 47.7
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.3e-77 294.3 264 58.0
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.7e-77 293.9 281 54.8
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 2.2e-77 293.5 289 53.6
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.2e-77 293.5 334 49.7
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 2.8e-77 293.1 355 47.3
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.8e-77 293.1 348 48.3
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 2.8e-77 293.1 360 46.7
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 4.8e-77 292.4 348 48.3
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 6.3e-77 292.0 292 52.7
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 6.3e-77 292.0 261 57.9
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.8e-76 290.4 283 53.4
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.8e-76 290.4 335 49.3
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.1e-76 289.7 281 54.8
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.1e-76 288.1 348 48.0
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 9.1e-76 288.1 297 50.5
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 1.6e-75 287.3 288 54.5
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.6e-75 287.3 300 52.3
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 3.5e-75 286.2 288 53.5
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 3.5e-75 286.2 325 47.1
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 4.5e-75 285.8 264 57.2
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 5.9e-75 285.4 358 48.0
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.0e-74 284.6 285 53.3
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.3e-74 284.3 290 51.7
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.9e-74 283.1 232 62.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 6.5e-74 282.0 340 49.7
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.9e-73 280.4 288 52.4
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 2.7e-72 276.6 353 44.8
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.4e-71 274.2 232 58.6
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 6.8e-71 271.9 354 44.6
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 6.8e-71 271.9 303 49.2
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 3.7e-69 266.2 343 45.2
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 1.1e-68 264.6 350 43.4
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.4e-68 264.2 341 45.7
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 5.9e-67 258.8 270 51.1
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 5.9e-67 258.8 205 61.0
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 3.0e-63 246.5 291 49.1
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.0e-58 231.5 270 47.8
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.2e-54 218.0 233 51.5
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 8.1e-40 168.7 162 54.3
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 4.4e-38 162.9 211 45.0
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 1.3e-29 134.8 136 51.5
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.0e-26 125.2 280 34.6
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.1e-15 88.6 74 58.1
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 6.9e-15 85.9 204 34.3
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 3.4e-14 83.6 294 26.2
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 1.9e-09 67.8 214 26.6
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 5.6e-09 66.2 128 39.8
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.6e-06 57.4 85 41.2


User provided reference genes

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