Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 3.9e-152 542.0 394 100.0
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 2.3e-51 207.2 177 60.5
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 9.9e-47 191.8 169 55.6
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 1.3e-43 181.4 180 55.6
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 3.1e-40 170.2 179 51.4
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 9.9e-39 165.2 178 49.4
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.1e-37 161.8 174 50.0
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 1.9e-37 161.0 174 51.7
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 1.9e-37 161.0 172 49.4
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 3.2e-37 160.2 173 50.9
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 1.6e-36 157.9 170 50.0
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 4.6e-36 156.4 174 47.7
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 6.6e-35 152.5 174 47.7
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.5e-34 151.4 184 45.1
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.5e-34 151.4 184 45.1
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 1.5e-34 151.4 172 49.4
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 1.5e-34 151.4 170 47.1
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 5.6e-34 149.4 194 42.3
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.6e-33 147.9 178 46.1
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 2.1e-33 147.5 163 48.5
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.1e-33 147.5 176 46.0
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 2.8e-33 147.1 191 44.0
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 8.1e-33 145.6 195 42.1
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 8.1e-33 145.6 185 43.8
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.4e-32 144.8 181 42.5
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 1.4e-32 144.8 201 43.3
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 3.1e-32 143.7 177 45.8
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 1.2e-31 141.7 185 44.9
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 1.5e-31 141.4 170 48.2
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 2.0e-31 141.0 178 43.8
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 2.6e-31 140.6 183 40.4
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 1.7e-30 137.9 168 45.8
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 8.4e-30 135.6 159 45.9
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.9e-29 134.4 162 46.3
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 5.4e-29 132.9 171 41.5
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 5.4e-29 132.9 184 40.8
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 7.1e-29 132.5 168 41.7
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 3.5e-28 130.2 166 42.8
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 1.0e-27 128.6 172 40.7
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 5.1e-27 126.3 159 45.3
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 6.7e-27 125.9 174 37.9
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 6.7e-27 125.9 157 41.4
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 2.5e-26 124.0 155 42.6
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 3.3e-26 123.6 155 41.9
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 3.7e-25 120.2 165 40.6
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 4.8e-25 119.8 167 41.9
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 6.2e-25 119.4 163 41.7
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 8.1e-25 119.0 162 42.0
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.8e-24 117.9 163 41.1
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 3.1e-24 117.1 198 37.9
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 5.3e-24 116.3 193 37.8
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 1.5e-23 114.8 173 37.0
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 7.6e-23 112.5 188 37.8
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 9.9e-23 112.1 191 35.6
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 1.3e-22 111.7 152 40.1
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 1.7e-22 111.3 164 36.6
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 2.2e-22 110.9 160 41.2
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 3.8e-22 110.2 138 44.9
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 3.8e-22 110.2 161 42.9
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 3.8e-22 110.2 154 42.9
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 4.9e-22 109.8 154 42.2
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 8.4e-22 109.0 193 35.8
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 8.4e-22 109.0 190 36.8
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 1.4e-21 108.2 136 41.9
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 2.5e-21 107.5 154 41.6
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 2.5e-21 107.5 176 35.2
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 4.2e-21 106.7 154 41.6
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 4.2e-21 106.7 154 41.6
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 7.1e-21 105.9 174 37.9
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 1.2e-20 105.1 189 34.4
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 1.6e-20 104.8 189 34.4
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 4.6e-20 103.2 175 36.6
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 7.9e-20 102.4 190 35.8
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 3.9e-19 100.1 205 31.7
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 8.7e-19 99.0 156 39.1
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 3.7e-17 93.6 146 37.7
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 1.4e-16 91.7 175 35.4
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 2.4e-16 90.9 168 35.1
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 2.4e-16 90.9 170 35.3
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 6.9e-16 89.4 142 39.4
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 2.0e-15 87.8 158 33.5
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 2.2e-14 84.3 151 35.1
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 2.9e-14 84.0 158 33.5
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 1.4e-13 81.6 171 31.0
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 3.2e-13 80.5 122 40.2
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 4.2e-13 80.1 98 42.9
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 7.1e-13 79.3 149 34.9
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 2.7e-12 77.4 134 40.3
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 6.0e-12 76.3 127 37.0
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 6.7e-11 72.8 151 31.8
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 5.7e-10 69.7 152 32.9
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 7.4e-10 69.3 183 32.2
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 3.7e-09 67.0 119 36.1
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 8.2e-09 65.9 131 35.9
MD14G1065400 Malus domestica HOM05D007281 ORTHO05D009241 5.3e-08 63.2 54 57.4
PSO478G0310 Papaver somniferum HOM05D000034 ORTHO05D000277 1.5e-07 61.6 40 65.0
PSO063G4946 Papaver somniferum HOM05D000034 ORTHO05D000037 2.0e-07 61.2 40 65.0
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 2.0e-07 61.2 114 33.3
PSO541G5955 Papaver somniferum HOM05D005706 ORTHO05D007474 2.2e-06 57.8 145 26.9
Nn4g22778 Nelumbo nucifera HOM05D000001 ORTHO05D000003 3.8e-06 57.0 139 34.5


User provided reference genes

Program Settings