Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 1.6e-53 212.6 115 100.0
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 5.3e-25 117.9 95 67.4
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 2.6e-24 115.5 93 63.4
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.1e-22 110.2 101 58.4
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 3.2e-22 108.6 93 58.1
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 2.3e-20 102.4 93 59.1
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 2.3e-20 102.4 98 55.1
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 5.1e-20 101.3 92 62.0
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 8.7e-20 100.5 96 56.2
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 1.1e-19 100.1 94 58.5
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.1e-19 100.1 95 57.9
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 1.1e-19 100.1 98 54.1
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 1.1e-19 100.1 98 54.1
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.9e-19 99.4 95 57.9
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 5.7e-19 97.8 93 51.6
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 5.7e-19 97.8 103 49.5
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 5.7e-19 97.8 98 53.1
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 7.4e-19 97.4 95 56.8
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 7.4e-19 97.4 96 54.2
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 2.2e-18 95.9 93 53.8
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 4.8e-18 94.7 93 53.8
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.4e-17 92.4 95 48.4
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 4.1e-17 91.7 93 51.6
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.1e-17 91.7 97 49.5
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.0e-16 89.4 98 49.0
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 2.6e-16 89.0 93 49.5
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.0e-15 87.0 93 50.5
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 1.0e-15 87.0 93 49.5
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 1.0e-15 87.0 93 48.4
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 6.5e-15 84.3 85 54.1
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 8.5e-15 84.0 98 46.9
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 8.5e-15 84.0 93 47.3
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 8.5e-15 84.0 83 50.6
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.4e-14 83.2 100 45.0
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 2.5e-14 82.4 99 47.5
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 2.5e-14 82.4 93 46.2
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.2e-14 81.6 101 44.6
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 4.2e-14 81.6 93 46.2
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 7.2e-14 80.9 93 49.5
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 1.2e-13 80.1 82 51.2
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 1.2e-13 80.1 93 44.1
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 1.6e-13 79.7 96 46.9
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 3.6e-13 78.6 93 48.4
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 3.6e-13 78.6 93 48.4
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 3.6e-13 78.6 89 47.2
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 1.0e-12 77.0 93 48.4
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 1.4e-12 76.6 96 44.8
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 1.8e-12 76.3 96 42.7
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 1.8e-12 76.3 94 43.6
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 1.8e-12 76.3 94 43.6
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 2.3e-12 75.9 94 48.9
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 2.3e-12 75.9 93 43.0
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 2.3e-12 75.9 93 48.4
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 3.0e-12 75.5 93 46.2
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 3.9e-12 75.1 93 47.3
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 5.1e-12 74.7 94 43.6
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 6.7e-12 74.3 92 46.7
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.1e-11 73.6 86 51.2
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.1e-11 73.6 93 46.2
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 1.5e-11 73.2 94 48.9
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 1.5e-11 73.2 93 41.9
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 1.5e-11 73.2 93 45.2
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 2.0e-11 72.8 94 46.8
Sabra19G0117300 Salix brachista HOM05D004838 ORTHO05D005373 2.5e-11 72.4 92 45.7
Sabra19G0136400 Salix brachista HOM05D004838 ORTHO05D005373 2.5e-11 72.4 92 45.7
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 7.4e-11 70.9 93 44.1
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 7.4e-11 70.9 93 40.9
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 1.7e-10 69.7 93 40.9
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 2.2e-10 69.3 93 46.2
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 3.7e-10 68.6 93 45.2
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 6.3e-10 67.8 93 39.8
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 8.2e-10 67.4 85 45.9
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 1.4e-09 66.6 93 44.1
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 1.4e-09 66.6 94 40.4
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 4.1e-09 65.1 97 46.4
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 4.1e-09 65.1 94 39.4
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 4.1e-09 65.1 83 43.4
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 6.9e-09 64.3 93 39.8
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 9.1e-09 63.9 93 38.7
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 1.5e-08 63.2 93 37.6
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 2.0e-08 62.8 94 38.3
Sabra13G0119300 Salix brachista HOM05D004838 ORTHO05D005373 4.5e-08 61.6 91 42.9
Lsat_1_v5_gn_3_40020 Lactuca sativa HOM05D004838 ORTHO05D005373 5.9e-08 61.2 78 43.6
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 5.9e-08 61.2 66 51.5
unitig_27.g24815 Utricularia gibba HOM05D004838 ORTHO05D005373 1.3e-07 60.1 94 40.4
unitig_699.g19386 Utricularia gibba HOM05D004838 ORTHO05D005373 2.9e-07 58.9 94 42.6
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.8e-07 58.5 82 41.5
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 3.2e-06 55.5 93 31.2
Sp7g26200 Schrenkiella parvula HOM05D004838 ORTHO05D005373 4.2e-06 55.1 93 37.6
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 4.2e-06 55.1 93 37.6
BcaB03g12560 Brassica carinata HOM05D004838 ORTHO05D005373 5.5e-06 54.7 93 37.6
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 5.5e-06 54.7 95 34.7
Lalb_Chr22g0356341 Lupinus albus HOM05D004838 ORTHO05D005373 5.5e-06 54.7 93 35.5
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 7.2e-06 54.3 93 35.5
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 7.2e-06 54.3 101 38.6
CDE10G0022 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 9.4e-06 53.9 93 35.5


User provided reference genes

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