Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23435 Striga asiatica HOM05D007156 ORTHO05D003871 6.8e-63 243.8 123 100.0
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 2.4e-23 112.5 129 56.6
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 1.9e-20 102.8 124 51.6
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 2.5e-12 75.9 131 42.7
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 1.0e-10 70.5 123 42.3
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 3.0e-10 68.9 117 39.3
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 8.8e-10 67.4 76 53.9
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 8.8e-10 67.4 90 51.1
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 1.5e-09 66.6 71 56.3
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 1.5e-09 66.6 126 43.7
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 2.0e-09 66.2 68 57.4
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 2.0e-09 66.2 125 40.8
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 2.6e-09 65.9 120 39.2
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 2.6e-09 65.9 62 56.5
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 4.4e-09 65.1 74 51.4
unitig_899.g15247 Utricularia gibba HOM05D007156 ORTHO05D003871 7.4e-09 64.3 123 40.7
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 9.7e-09 63.9 68 52.9
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 1.3e-08 63.5 112 43.8
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.7e-08 63.2 61 57.4
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.7e-08 63.2 62 54.8
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 1.7e-08 63.2 62 59.7
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 1.7e-08 63.2 56 60.7
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 2.2e-08 62.8 69 53.6
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 2.2e-08 62.8 46 65.2
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 2.8e-08 62.4 77 49.4
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 3.7e-08 62.0 58 60.3
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 3.7e-08 62.0 68 50.0
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 3.7e-08 62.0 120 42.5
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 6.3e-08 61.2 120 37.5
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 1.1e-07 60.5 70 52.9
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 1.1e-07 60.5 51 62.7
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 1.1e-07 60.5 120 39.2
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 1.1e-07 60.5 51 64.7
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 1.4e-07 60.1 53 60.4
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 1.4e-07 60.1 62 51.6
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 1.4e-07 60.1 51 62.7
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 1.8e-07 59.7 117 40.2
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 1.8e-07 59.7 118 39.0
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 3.1e-07 58.9 71 47.9
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 3.1e-07 58.9 50 62.0
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 3.1e-07 58.9 44 70.5
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 3.1e-07 58.9 113 38.9
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 4.1e-07 58.5 72 54.2
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 5.3e-07 58.2 52 61.5
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 5.3e-07 58.2 52 61.5
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 5.3e-07 58.2 52 61.5
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 5.3e-07 58.2 52 61.5
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 5.3e-07 58.2 52 61.5
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 5.3e-07 58.2 70 50.0
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 5.3e-07 58.2 69 53.6
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 7.0e-07 57.8 64 56.2
Nitab4.5_0001134g0060 Nicotiana tabacum HOM05D007156 ORTHO05D003871 7.0e-07 57.8 71 47.9
Peaxi162Scf00007g00157 Petunia axillaris HOM05D007156 ORTHO05D003871 7.0e-07 57.8 66 53.0
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 7.0e-07 57.8 120 40.8
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 7.0e-07 57.8 118 39.0
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 9.1e-07 57.4 70 52.9
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 9.1e-07 57.4 78 46.2
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 9.1e-07 57.4 81 44.4
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 9.1e-07 57.4 88 43.2
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 9.1e-07 57.4 62 53.2
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.2e-06 57.0 82 45.1
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.2e-06 57.0 82 45.1
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.5e-06 56.6 69 47.8
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.0e-06 56.2 82 45.1
ClCG02G011170 Citrullus lanatus HOM05D007156 ORTHO05D003871 2.6e-06 55.8 87 42.5
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.6e-06 55.8 77 45.5
Solyc12g005690.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 2.6e-06 55.8 102 40.2
CsaV3_6G012600 Cucumis sativus L. HOM05D007156 ORTHO05D003871 3.4e-06 55.5 60 53.3
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 3.4e-06 55.5 59 52.5
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 4.5e-06 55.1 72 44.4
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 4.5e-06 55.1 106 42.5
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 7.7e-06 54.3 122 37.7
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 7.7e-06 54.3 85 41.2
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 7.7e-06 54.3 52 55.8


User provided reference genes

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