Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 6.9e-224 780.4 420 100.0
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 2.5e-109 399.8 437 58.6
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 8.5e-105 384.8 431 57.1
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 6.7e-94 348.6 427 54.8
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 1.3e-73 281.2 433 46.9
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 5.8e-61 239.2 550 38.2
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 9.8e-61 238.4 431 41.5
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 7.0e-59 232.3 439 42.1
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 4.0e-54 216.5 439 40.1
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 4.4e-53 213.0 433 39.5
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 8.3e-52 208.8 453 39.3
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 3.2e-51 206.8 440 43.0
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.1e-51 206.5 446 38.3
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 2.1e-50 204.1 437 37.8
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.3e-49 201.4 441 40.6
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 5.1e-49 199.5 444 36.9
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 8.6e-49 198.7 438 39.0
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 3.3e-48 196.8 448 36.8
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 7.3e-48 195.7 453 39.5
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 1.2e-47 194.9 437 38.4
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 8.1e-47 192.2 422 39.3
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 1.4e-46 191.4 435 38.4
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 2.3e-46 190.7 435 36.3
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 6.8e-46 189.1 436 36.2
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.5e-45 188.0 429 39.4
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 4.4e-45 186.4 443 35.4
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.3e-44 184.9 470 36.2
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 1.7e-44 184.5 457 35.9
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 6.4e-44 182.6 384 37.2
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.4e-43 180.6 444 36.5
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 7.8e-42 175.6 450 35.3
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.3e-41 174.9 340 42.6
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.7e-41 174.5 428 35.7
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 3.9e-41 173.3 282 45.7
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 3.9e-41 173.3 444 35.8
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 1.1e-40 171.8 433 35.3
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 3.3e-40 170.2 439 36.0
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 4.7e-39 166.4 434 35.9
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 6.2e-39 166.0 441 35.6
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 8.1e-39 165.6 427 37.9
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 1.4e-38 164.9 467 35.3
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 2.4e-38 164.1 253 45.1
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 4.0e-38 163.3 457 33.3
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 5.2e-38 162.9 458 35.2
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 6.8e-38 162.5 384 36.2
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 3.4e-37 160.2 437 34.8
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.4e-37 160.2 447 34.2
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 1.3e-36 158.3 440 34.1
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 2.9e-36 157.1 503 33.4
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 2.9e-36 157.1 430 34.7
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 3.8e-36 156.8 502 31.7
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 3.8e-36 156.8 436 34.2
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 8.4e-36 155.6 439 35.3
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-35 154.1 500 32.0
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 3.2e-35 153.7 507 31.4
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 2.1e-34 151.0 451 34.1
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 2.3e-33 147.5 436 32.6
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 2.3e-33 147.5 402 34.1
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 1.5e-32 144.8 454 34.4
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 1.5e-32 144.8 413 33.9
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 1.9e-32 144.4 463 34.1
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 1.6e-31 141.4 452 31.9
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 2.8e-31 140.6 451 33.5
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 3.6e-31 140.2 422 33.4
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.1e-30 138.7 312 37.2
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 3.1e-30 137.1 437 33.0
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 4.0e-30 136.7 341 36.1
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 6.9e-30 136.0 487 32.4
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 9.0e-30 135.6 460 32.4
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 2.6e-29 134.0 209 44.0
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 5.8e-29 132.9 432 31.9
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.3e-28 131.7 426 32.9
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.9e-28 130.6 411 33.6
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 4.9e-28 129.8 390 31.8
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 6.4e-28 129.4 441 31.1
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 1.9e-27 127.9 441 32.2
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 2.4e-27 127.5 409 36.2
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 4.2e-27 126.7 444 30.9
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 5.4e-27 126.3 439 32.1
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 5.4e-27 126.3 440 31.1
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 7.8e-26 122.5 359 35.1
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.3e-25 121.7 438 32.0
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 3.0e-25 120.6 374 33.7
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 6.6e-25 119.4 439 31.4
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 8.7e-25 119.0 444 30.9
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.1e-24 118.6 432 29.4
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.9e-24 117.9 439 31.2
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 4.8e-23 113.2 416 31.0
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 7.6e-21 105.9 355 33.2
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.7e-20 104.8 386 30.3
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 8.4e-20 102.4 528 25.4
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 8.4e-20 102.4 265 36.6
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.4e-19 101.7 382 29.1
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 7.1e-19 99.4 413 31.2
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.6e-18 98.2 178 42.7
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 6.0e-18 96.3 448 28.3
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.1e-16 92.0 333 29.7
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.9e-16 91.3 130 50.0
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 4.8e-15 86.7 269 32.7
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.4e-14 85.1 381 28.9
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.4e-14 85.1 405 28.4
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 2.4e-14 84.3 358 29.6
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 3.1e-14 84.0 459 27.2
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 4.0e-14 83.6 476 29.2
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 6.4e-12 76.3 88 46.6
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 1.9e-11 74.7 384 26.6
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 1.9e-11 74.7 430 26.5
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.0e-09 67.4 82 51.2
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.3e-08 63.5 84 44.0
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 5.6e-08 63.2 395 26.8
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 5.6e-08 63.2 396 26.8
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 7.4e-08 62.8 38 76.3
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 7.4e-08 62.8 240 32.1
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 2.8e-07 60.8 228 28.1
TPR.G1791 Trifolium pratense HOM05D005864 ORTHO05D006770 1.4e-06 58.5 66 51.5
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 1.4e-06 58.5 519 25.4


User provided reference genes

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