Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 0.0e+00 1318.9 660 100.0
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 2.5e-300 1035.0 657 79.0
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 9.7e-289 996.5 659 77.8
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 1.8e-274 949.1 681 73.0
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 5.4e-247 857.8 658 68.4
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 2.2e-232 809.3 671 66.3
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.9e-232 808.9 671 65.1
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 6.4e-232 807.7 666 64.9
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.9e-228 796.2 672 64.7
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.6e-227 793.1 674 64.8
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.2e-227 791.2 663 64.0
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 4.0e-226 788.5 666 63.5
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 1.2e-225 786.9 668 64.8
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.0e-225 786.2 664 63.7
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.0e-225 786.2 661 63.7
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 3.4e-225 785.4 658 64.1
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 1.3e-224 783.5 661 63.7
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 2.2e-224 782.7 680 62.6
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 2.9e-224 782.3 680 62.9
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 4.9e-224 781.6 662 63.6
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 4.9e-224 781.6 668 63.2
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 2.4e-223 779.2 671 63.3
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.1e-223 777.7 676 64.3
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.1e-223 777.7 666 65.0
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 7.8e-222 774.2 666 62.5
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 1.0e-221 773.9 661 63.4
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.7e-221 773.1 664 63.9
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 5.1e-221 771.5 676 63.9
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 6.6e-221 771.2 672 63.1
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 3.3e-220 768.8 660 62.4
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 3.3e-220 768.8 671 64.4
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 5.6e-220 768.1 665 63.6
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 1.6e-219 766.5 677 62.5
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 6.2e-219 764.6 670 64.0
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.4e-217 758.4 673 61.2
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 9.9e-217 757.3 674 62.3
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.9e-217 757.3 673 61.4
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 2.2e-216 756.1 704 60.4
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 2.1e-214 749.6 683 60.5
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 3.5e-214 748.8 675 60.9
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 4.6e-214 748.4 667 62.1
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.3e-213 746.9 672 61.6
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 3.0e-213 745.7 666 61.9
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.1e-213 745.0 673 60.0
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 5.6e-212 741.5 673 60.5
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 7.3e-212 741.1 671 61.1
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 9.6e-212 740.7 669 60.2
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 2.8e-211 739.2 678 62.2
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 3.6e-211 738.8 669 60.4
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 1.4e-210 736.9 667 60.7
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 6.9e-210 734.6 675 60.6
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 1.5e-209 733.4 672 60.3
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 4.9e-208 728.4 663 61.2
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 2.4e-207 726.1 586 65.5
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 2.4e-207 726.1 675 59.1
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 3.2e-207 725.7 680 59.3
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 1.2e-206 723.8 678 58.6
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 2.1e-206 723.0 672 60.4
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.7e-206 722.6 673 59.4
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 2.7e-206 722.6 686 59.2
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 4.6e-206 721.8 679 57.7
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 1.3e-205 720.3 663 59.4
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 3.0e-205 719.2 679 59.1
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.5e-204 716.8 674 60.4
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 1.3e-203 713.8 690 58.4
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 2.1e-203 713.0 685 58.4
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 3.6e-203 712.2 679 58.0
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 4.8e-203 711.8 687 57.8
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 4.8e-203 711.8 672 58.2
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 6.2e-203 711.4 675 59.1
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.5e-201 706.8 685 57.7
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 1.5e-201 706.8 683 58.3
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.5e-201 706.8 669 59.5
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 1.5e-201 706.8 673 59.1
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 4.5e-201 705.3 668 59.3
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 9.9e-201 704.1 688 57.6
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.3e-200 703.7 666 58.4
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 2.2e-200 703.0 680 58.4
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 4.9e-200 701.8 668 57.9
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 6.4e-200 701.4 681 56.4
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 1.1e-199 700.7 677 59.2
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 5.4e-199 698.4 677 59.2
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 7.1e-199 698.0 667 58.0
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 1.6e-198 696.8 700 56.4
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 1.6e-198 696.8 661 58.7
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 1.6e-198 696.8 667 58.3
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 5.1e-197 691.8 602 62.6
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 2.1e-195 686.4 650 59.5
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 1.1e-194 684.1 675 56.6
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 4.5e-193 678.7 690 57.0
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 1.3e-192 677.2 645 58.8
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 7.9e-190 667.9 690 54.9
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 5.1e-189 665.2 653 57.1
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.3e-188 662.1 706 54.4
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.3e-188 662.1 721 54.4
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.1e-187 659.8 682 57.0
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 1.8e-186 656.8 661 55.5
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 1.2e-185 654.1 672 56.1
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 4.5e-185 652.1 679 55.5
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 4.5e-185 652.1 674 56.1
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.7e-184 650.2 668 56.0
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 2.2e-184 649.8 671 55.1
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 4.9e-184 648.7 657 55.9
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 2.1e-182 643.3 679 53.9
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 6.7e-181 638.3 674 54.3
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 4.3e-180 635.6 695 53.4
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 1.6e-179 633.6 672 54.0
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 2.1e-179 633.3 691 53.1
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 1.4e-175 620.5 699 52.1
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 5.7e-172 608.6 701 51.6
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 1.3e-171 607.4 644 53.4
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 2.2e-171 606.7 644 53.9
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 2.8e-171 606.3 650 53.8
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 3.7e-171 605.9 658 54.3
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 3.8e-168 595.9 582 57.2
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 6.5e-168 595.1 669 51.7
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 7.9e-166 588.2 680 51.9
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 3.9e-165 585.9 649 52.9
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.4e-164 582.4 644 53.0
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 6.5e-160 568.5 643 53.8
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 6.5e-160 568.5 521 62.4
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 3.9e-157 559.3 722 48.2
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 1.1e-156 557.8 517 58.8
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 9.7e-156 554.7 503 60.2
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.8e-155 553.1 688 48.0
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.2e-151 539.3 688 47.2
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.4e-146 524.2 592 52.4
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.4e-146 523.5 652 48.8
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.6e-145 520.8 689 47.3
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 4.0e-141 506.1 540 54.6
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 5.7e-132 475.7 512 53.9
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.3e-128 464.5 510 54.1
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 2.8e-126 456.8 554 50.9
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 3.4e-124 449.9 469 57.6
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.7e-123 447.6 443 58.2
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.7e-120 437.6 601 45.4
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 4.3e-119 433.0 662 43.8
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.4e-117 427.9 672 42.9
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.3e-117 427.2 708 40.4
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 9.8e-116 421.8 447 56.6
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 3.2e-114 416.8 598 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 7.8e-113 412.1 676 41.1
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 8.9e-109 398.7 262 79.4
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 2.0e-108 397.5 487 49.5
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.9e-103 380.9 550 45.3
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 9.5e-103 378.6 375 58.1
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 6.4e-99 365.9 352 59.7
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 7.3e-95 352.4 805 34.9
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.1e-93 348.6 677 38.0
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.0e-93 345.5 279 65.9
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 3.9e-88 330.1 279 59.1
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 2.1e-81 307.8 414 44.9
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 2.1e-70 271.2 684 33.2
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 5.3e-69 266.5 261 60.2
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 4.5e-68 263.5 285 47.4
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 6.5e-67 259.6 614 35.5
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 3.2e-66 257.3 414 42.5
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.3e-64 251.9 328 45.1
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 5.3e-53 213.4 208 54.8
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 6.3e-46 189.9 709 28.9
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 1.4e-45 188.7 229 52.4
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 1.3e-35 155.6 249 40.6
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 5.5e-34 150.2 168 50.6
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 2.2e-30 138.3 164 52.4
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 3.2e-26 124.4 130 52.3
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 2.4e-21 108.2 81 67.9
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 1.6e-20 105.5 88 56.8
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 3.5e-20 104.4 61 85.2
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 5.0e-19 100.5 104 53.8
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 9.5e-18 96.3 68 61.8
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 2.8e-17 94.7 124 41.1
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 4.7e-17 94.0 104 51.9
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 2.8e-14 84.7 75 62.7
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 2.4e-13 81.6 88 56.8
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 1.6e-12 79.0 50 68.0
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 5.9e-12 77.0 148 37.2
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-11 75.9 41 87.8
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 5.0e-11 73.9 101 42.6
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 6.6e-11 73.6 48 62.5
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 8.6e-11 73.2 82 51.2
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.5e-10 71.6 79 46.8
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 7.3e-10 70.1 59 59.3
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 3.6e-09 67.8 57 57.9
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-07 62.4 85 38.8
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 2.6e-07 61.6 46 60.9
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 2.9e-06 58.2 48 60.4
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 3.7e-06 57.8 184 23.9


User provided reference genes

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