Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold707G53490 Striga asiatica HOM05D029710 ORTHO05D028470 1.7e-117 426.0 209 100.0
SGA_v2.0_scaffold111G31416 Striga asiatica HOM05D029710 ORTHO05D028470 1.6e-27 127.1 157 52.9
SGA_v2.0_scaffold137G35103 Striga asiatica HOM05D001734 ORTHO05D028470 1.3e-21 107.5 58 91.4
MSTRG.2696 Avicennia marina HOM05D000624 ORTHO05D000495 1.4e-12 77.4 74 59.5
Oeu062507.1 Olea europaea HOM05D000624 ORTHO05D000495 2.1e-11 73.6 74 56.8
SGA_v2.0_scaffold272G46360 Striga asiatica HOM05D029710 ORTHO05D404055 2.1e-11 73.6 37 89.2
Oeu035300.1 Olea europaea HOM05D000624 ORTHO05D000495 1.0e-10 71.2 67 59.7
SGA_v2.0_scaffold207G41898 Striga asiatica HOM05D029710 ORTHO05D399478 3.9e-10 69.3 31 96.8
Peaxi162Scf00083g00087 Petunia axillaris HOM05D000624 ORTHO05D000495 8.7e-10 68.2 49 61.2
Nitab4.5_0004254g0020 Nicotiana tabacum HOM05D000624 ORTHO05D000495 1.5e-09 67.4 58 58.6
Nitab4.5_0005721g0080 Nicotiana tabacum HOM05D000624 ORTHO05D000495 1.5e-09 67.4 58 58.6
CSS0012483 Camellia sinensis var. sinensis HOM05D000624 ORTHO05D000495 2.5e-09 66.6 63 49.2
Cc07_g10550 Coffea canephora HOM05D000624 ORTHO05D000495 2.5e-09 66.6 34 73.5
Migut.H01143 Erythranthe guttata HOM05D000624 ORTHO05D000495 2.5e-09 66.6 95 43.2
Hma1.2p1_0743F.1_g211543 Hydrangea macrophylla HOM05D000624 ORTHO05D000495 2.5e-09 66.6 75 48.0
Hma1.2p1_2281F.1_g318740 Hydrangea macrophylla HOM05D000624 ORTHO05D000495 2.5e-09 66.6 75 48.0
Hma1.2p1_2281F.1_g318750 Hydrangea macrophylla HOM05D000624 ORTHO05D000495 2.5e-09 66.6 75 48.0
CAN.G900.54 Capsicum annuum HOM05D000624 ORTHO05D000495 4.3e-09 65.9 67 50.7
HanXRQChr16g0531041 Helianthus annuus HOM05D000624 ORTHO05D000495 5.7e-09 65.5 71 50.7
Lj2C465T10 Lonicera japonica HOM05D000624 ORTHO05D000495 7.4e-09 65.1 78 46.2
CSS0004712 Camellia sinensis var. sinensis HOM05D000624 ORTHO05D000495 1.3e-08 64.3 70 47.1
Sopen02g028970 Solanum pennellii HOM05D000624 ORTHO05D000495 8.2e-08 61.6 58 53.4
CAN.G108.3 Capsicum annuum HOM05D000624 ORTHO05D028470 1.8e-07 60.5 58 50.0
DCAR_021496 Daucus carota HOM05D000624 ORTHO05D000495 1.8e-07 60.5 73 43.8
Solyc02g084230.3 Solanum lycopersicum HOM05D000624 ORTHO05D000495 1.8e-07 60.5 58 51.7
vmacro21913 Vaccinium macrocarpon HOM05D000624 ORTHO05D000495 1.8e-07 60.5 79 45.6
PGSC0003DMG400003553 Solanum tuberosum HOM05D000624 ORTHO05D000495 4.1e-07 59.3 58 53.4
Lsat_1_v5_gn_3_73960 Lactuca sativa HOM05D000624 ORTHO05D000495 6.9e-07 58.5 35 62.9
Rhsim10G0213600 Rhododendron simsii HOM05D000624 ORTHO05D000495 9.0e-07 58.2 71 46.5
CDE05G3502 Ceratophyllum demersum HOM05D000624 ORTHO05D000495 4.5e-06 55.8 36 61.1
CDE05G2790 Ceratophyllum demersum HOM05D000624 ORTHO05D000495 5.9e-06 55.5 36 61.1
Dinv33613 Davidia involucrata HOM05D000624 ORTHO05D000495 5.9e-06 55.5 74 40.5
Dinv40069 Davidia involucrata HOM05D000624 ORTHO05D000495 1.0e-05 54.7 77 36.4


User provided reference genes

Program Settings