Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03459 Striga asiatica HOM05D004348 ORTHO05D006191 2.5e-53 211.8 105 100.0
SGA_v2.0_scaffold162G37946 Striga asiatica HOM05D004348 ORTHO05D006191 8.2e-25 117.1 98 63.3
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 1.7e-17 92.8 46 91.3
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 8.3e-17 90.5 46 89.1
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 1.8e-16 89.4 46 84.8
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 2.4e-16 89.0 46 82.6
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 4.1e-16 88.2 46 82.6
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.4e-16 87.8 46 84.8
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.4e-16 87.8 46 84.8
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 7.0e-16 87.4 46 80.4
MD08G1105800 Malus domestica HOM05D004348 ORTHO05D006191 9.1e-16 87.0 46 82.6
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 9.1e-16 87.0 49 75.5
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 1.2e-15 86.7 46 80.4
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 1.2e-15 86.7 46 82.6
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.2e-15 86.7 46 82.6
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 1.6e-15 86.3 46 80.4
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 1.6e-15 86.3 46 80.4
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 1.6e-15 86.3 46 82.6
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 1.6e-15 86.3 46 80.4
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 82.6
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 78.3
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 82.6
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 80.4
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 80.4
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 82.6
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 2.0e-15 85.9 46 80.4
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 2.7e-15 85.5 46 80.4
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 2.7e-15 85.5 46 82.6
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 2.7e-15 85.5 46 80.4
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 2.7e-15 85.5 47 78.7
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 82.6
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 80.4
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 80.4
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 80.4
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 80.4
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 82.6
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 80.4
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 3.5e-15 85.1 46 78.3
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 80.4
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 80.4
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 80.4
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 78.3
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 78.3
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 80.4
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 76.1
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 4.5e-15 84.7 46 80.4
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 5.9e-15 84.3 46 78.3
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 5.9e-15 84.3 46 78.3
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 5.9e-15 84.3 46 78.3
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 5.9e-15 84.3 46 80.4
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 5.9e-15 84.3 46 78.3
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 7.7e-15 84.0 46 76.1
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 7.7e-15 84.0 46 76.1
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 7.7e-15 84.0 46 80.4
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 7.7e-15 84.0 46 78.3
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 7.7e-15 84.0 46 80.4
TPR.G40548 Trifolium pratense HOM05D004348 ORTHO05D006191 7.7e-15 84.0 46 78.3
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.0e-14 83.6 46 76.1
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 1.0e-14 83.6 46 80.4
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.0e-14 83.6 46 78.3
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 1.3e-14 83.2 46 80.4
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.3e-14 83.2 46 80.4
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 1.7e-14 82.8 46 78.3
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 1.7e-14 82.8 46 78.3
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 2.2e-14 82.4 46 76.1
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 2.2e-14 82.4 46 76.1
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 80.4
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 78.3
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 76.1
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 76.1
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 76.1
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 76.1
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 76.1
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 76.1
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 78.3
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 78.3
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 78.3
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 2.9e-14 82.0 46 78.3
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 3.8e-14 81.6 46 76.1
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 3.8e-14 81.6 46 76.1
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 5.0e-14 81.3 46 76.1
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 5.0e-14 81.3 46 76.1
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 6.5e-14 80.9 46 76.1
SGA_v2.0_scaffold42G16154 Striga asiatica HOM05D000627 ORTHO05D006191 1.1e-13 80.1 53 77.4
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 1.5e-13 79.7 46 73.9
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 1.5e-13 79.7 46 73.9
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 1.9e-13 79.3 52 71.2
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.9e-13 79.3 46 76.1
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 1.9e-13 79.3 46 76.1
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 4.2e-13 78.2 50 70.0
CiPaw.16G046800 Carya illinoinensis HOM05D004348 ORTHO05D006191 9.5e-13 77.0 46 76.1
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 1.2e-12 76.6 46 76.1
HPP92_019296 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.2e-12 76.6 46 71.7
HPP92_028299 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.2e-12 76.6 46 71.7
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 1.6e-12 76.3 46 71.7
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.1e-12 75.9 46 76.1
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 2.1e-12 75.9 46 71.7
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.7e-12 75.5 46 76.1
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 8.0e-12 73.9 46 73.9
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 1.4e-11 73.2 46 73.9
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 1.5e-10 69.7 46 73.9
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 2.0e-10 69.3 44 70.5
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 3.4e-10 68.6 46 65.2
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 4.4e-10 68.2 46 71.7
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 2.8e-09 65.5 46 63.0
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 4.9e-09 64.7 44 63.6
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 4.1e-08 61.6 46 60.9
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 1.7e-06 56.2 46 52.2


User provided reference genes

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