Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.3e-230 802.7 405 100.0
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.5e-114 417.2 397 58.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.2e-113 411.8 398 56.3
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 4.2e-93 345.9 397 50.6
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.8e-89 332.4 398 47.2
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 2.0e-87 327.0 385 49.9
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.1e-85 321.2 389 46.5
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 3.6e-84 316.2 401 46.6
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 4.8e-81 305.8 355 49.6
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 4.8e-81 305.8 355 50.1
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 6.3e-81 305.4 401 46.9
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 1.4e-80 304.3 405 46.9
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.4e-80 303.5 346 49.7
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 9.1e-80 301.6 357 49.9
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 1.7e-78 297.4 367 48.2
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 5.0e-78 295.8 397 45.1
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 6.5e-78 295.4 362 45.6
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 3.2e-77 293.1 366 46.7
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 3.2e-77 293.1 362 45.9
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 5.5e-77 292.4 350 47.1
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 5.5e-77 292.4 360 45.0
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 7.2e-77 292.0 360 45.3
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.2e-76 291.2 360 45.6
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 1.6e-76 290.8 362 46.1
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 2.1e-76 290.4 357 47.1
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 4.7e-76 289.3 360 47.2
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.1e-76 288.9 353 49.3
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 6.1e-76 288.9 361 46.8
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 8.0e-76 288.5 364 45.9
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.0e-75 288.1 403 45.2
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.8e-75 287.3 362 45.6
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 4.0e-75 286.2 354 44.9
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 5.2e-75 285.8 362 45.3
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 5.2e-75 285.8 353 45.9
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 5.2e-75 285.8 395 44.8
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 6.7e-75 285.4 353 44.8
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 6.7e-75 285.4 401 43.1
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 8.8e-75 285.0 398 43.2
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 2.6e-74 283.5 361 44.9
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 5.7e-74 282.3 394 42.6
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 1.7e-73 280.8 322 49.1
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.7e-73 280.8 399 42.6
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 2.8e-73 280.0 363 45.7
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 4.8e-73 279.3 360 46.4
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.1e-72 278.1 403 44.4
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.4e-72 277.7 363 45.7
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.4e-72 277.7 400 42.2
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 2.4e-72 276.9 374 44.7
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 3.1e-72 276.6 364 47.0
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 3.5e-71 273.1 384 44.0
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 4.5e-71 272.7 371 43.1
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 4.5e-71 272.7 375 45.1
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.5e-71 272.7 345 45.5
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 5.9e-71 272.3 353 43.3
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 7.7e-71 271.9 354 45.8
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 5.0e-70 269.2 347 45.2
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 1.5e-69 267.7 392 43.9
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 2.5e-69 266.9 341 45.7
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 3.2e-69 266.5 398 41.5
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 7.2e-69 265.4 375 44.3
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 7.2e-69 265.4 398 39.9
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 1.6e-68 264.2 391 43.7
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.6e-68 264.2 341 46.6
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.6e-68 264.2 359 44.8
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.6e-68 263.1 352 45.7
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 1.0e-67 261.5 375 44.0
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.8e-67 260.8 349 46.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.8e-67 260.8 349 46.7
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.3e-67 260.4 340 46.2
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 3.0e-67 260.0 361 42.9
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 6.8e-67 258.8 367 41.4
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.2e-66 258.1 339 45.1
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 3.4e-66 256.5 340 45.3
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.4e-66 256.5 340 45.3
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 5.7e-66 255.8 363 43.3
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 5.7e-66 255.8 363 43.3
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 4.8e-65 252.7 360 43.3
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 5.9e-63 245.7 358 42.7
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 2.3e-62 243.8 355 41.4
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.3e-62 243.8 358 43.0
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 2.9e-62 243.4 316 45.9
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 7.2e-61 238.8 362 40.1
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 4.7e-60 236.1 291 47.4
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.0e-59 235.0 370 40.3
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 6.8e-59 232.3 304 44.7
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.2e-58 231.5 312 44.9
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.0e-55 220.7 354 41.2
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 2.3e-54 217.2 348 39.4
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 7.3e-53 212.2 287 45.3
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.8e-51 207.6 291 44.0
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.2e-48 196.8 358 36.9
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 4.1e-48 196.4 297 43.4
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.6e-47 193.0 339 38.6
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 3.0e-46 190.3 285 40.7
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 5.6e-45 186.0 357 35.6
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 9.5e-45 185.3 385 35.8
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.2e-41 174.1 230 48.3
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.2e-41 174.1 230 48.3
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 6.4e-41 172.6 371 35.3
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 7.0e-40 169.1 229 47.2
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.8e-35 154.5 207 40.1
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 6.4e-33 146.0 180 47.2
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 3.5e-31 140.2 237 40.1
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 6.2e-28 129.4 166 42.2
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.9e-27 125.6 125 52.8
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.9e-27 125.6 125 52.8
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 7.6e-26 122.5 167 42.5
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 8.4e-25 119.0 313 29.1
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.7e-22 111.3 116 51.7
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 3.6e-20 103.6 164 41.5
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.0e-19 100.1 223 35.0
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 3.4e-18 97.1 404 25.2
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 2.1e-15 87.8 248 28.2
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 4.6e-15 86.7 308 28.2
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.1e-13 82.0 186 36.6
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.5e-10 71.6 115 40.9


User provided reference genes

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