Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03369 Striga asiatica HOM05D007418 ORTHO05D009419 2.5e-110 402.1 204 100.0
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 6.6e-71 271.2 183 76.5
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 5.6e-70 268.1 212 67.9
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 1.2e-67 260.4 204 68.6
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 8.7e-55 217.6 203 57.6
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 1.9e-54 216.5 203 57.6
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 7.4e-54 214.5 208 55.8
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 2.8e-53 212.6 196 56.1
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 4.8e-53 211.8 158 66.5
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 9.0e-52 207.6 204 53.4
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 2.2e-50 203.0 186 55.9
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 3.5e-48 195.7 203 50.2
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 1.5e-46 190.3 223 48.9
Nitab4.5_0004630g0080 Nicotiana tabacum HOM05D007418 ORTHO05D009419 2.5e-46 189.5 166 59.0
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 2.4e-44 183.0 124 70.2
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 9.0e-44 181.0 197 48.2
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 2.0e-43 179.9 181 51.9
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 3.4e-43 179.1 159 56.6
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 1.3e-42 177.2 159 56.0
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 2.2e-42 176.4 195 49.2
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 4.2e-41 172.2 159 50.9
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 4.6e-40 168.7 165 50.9
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 1.0e-39 167.5 159 51.6
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 1.3e-39 167.2 187 46.0
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 8.7e-39 164.5 127 64.6
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 1.5e-38 163.7 158 53.2
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 1.5e-38 163.7 218 45.0
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 3.3e-38 162.5 159 54.1
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 4.3e-38 162.2 169 49.7
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 5.7e-38 161.8 151 50.3
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 5.7e-38 161.8 162 52.5
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 9.7e-38 161.0 132 62.9
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 2.8e-37 159.5 183 46.4
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 3.7e-37 159.1 130 63.1
Nitab4.5_0002351g0010 Nicotiana tabacum HOM05D007418 ORTHO05D009419 4.8e-37 158.7 163 57.1
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 6.3e-37 158.3 171 48.5
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 6.3e-37 158.3 190 44.7
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 1.1e-36 157.5 158 50.0
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 1.1e-36 157.5 107 74.8
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 1.8e-36 156.8 204 42.6
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 2.4e-36 156.4 158 48.7
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 2.4e-36 156.4 209 43.1
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 4.1e-36 155.6 174 45.4
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 4.1e-36 155.6 215 42.3
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 6.9e-36 154.8 169 49.1
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 6.9e-36 154.8 208 42.3
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 9.0e-36 154.5 157 49.7
CiPaw.13G176700 Carya illinoinensis HOM05D007418 ORTHO05D009419 9.0e-36 154.5 158 50.0
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 9.0e-36 154.5 118 61.9
Sed0010168 Sechium edule HOM05D007418 ORTHO05D009419 9.0e-36 154.5 210 41.9
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 1.5e-35 153.7 165 47.9
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 1.5e-35 153.7 165 47.9
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 2.6e-35 152.9 208 42.3
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 3.4e-35 152.5 200 42.0
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 3.4e-35 152.5 165 47.3
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 4.5e-35 152.1 140 51.4
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 7.7e-35 151.4 157 49.0
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 7.7e-35 151.4 202 41.6
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 1.0e-34 151.0 170 47.1
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 1.3e-34 150.6 169 47.9
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 1.3e-34 150.6 158 47.5
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 1.7e-34 150.2 162 50.6
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 1.7e-34 150.2 167 47.9
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 2.2e-34 149.8 168 45.2
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 2.9e-34 149.4 191 42.9
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 6.5e-34 148.3 207 41.1
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 8.5e-34 147.9 157 48.4
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 8.5e-34 147.9 157 48.4
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 8.5e-34 147.9 157 48.4
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 8.5e-34 147.9 157 48.4
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 1.1e-33 147.5 168 43.5
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 1.1e-33 147.5 165 47.3
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 1.4e-33 147.1 199 43.2
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 2.5e-33 146.4 157 48.4
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 3.2e-33 146.0 163 46.6
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 4.2e-33 145.6 145 49.7
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 5.5e-33 145.2 163 49.7
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 1.2e-32 144.1 201 41.3
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 2.1e-32 143.3 153 49.0
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 4.6e-32 142.1 170 44.7
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 7.9e-32 141.4 233 38.2
Sc06g0004180 Simmondsia chinensis HOM05D007418 ORTHO05D009419 1.0e-31 141.0 114 57.0
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 1.4e-31 140.6 157 48.4
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.4e-31 140.6 204 40.2
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 2.3e-31 139.8 199 40.2
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 3.0e-31 139.4 160 43.1
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 8.8e-31 137.9 204 40.2
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 2.4e-28 129.8 159 42.8
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 9.1e-28 127.9 116 54.3
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 2.2e-26 123.2 161 42.9
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 2.9e-26 122.9 130 50.8
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 6.5e-26 121.7 305 31.8
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 7.2e-25 118.2 205 37.1
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 4.7e-24 115.5 129 48.1
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.0e-23 114.4 200 36.0
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 5.9e-19 98.6 95 53.7
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 6.7e-15 85.1 158 33.5
QL04p006930 Quercus lobata HOM05D007418 ORTHO05D009419 7.5e-14 81.6 83 53.0
FAN16G1782 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.8e-12 77.0 123 38.2
Cre06.g263050 Chlamydomonas reinhardtii HOM05D007418 ORTHO05D009419 5.9e-11 72.0 171 27.5
SHI31291 Sapria himalayana HOM05D007418 ORTHO05D009419 1.7e-10 70.5 112 37.5
TPR.G6905 Trifolium pratense HOM05D009845 ORTHO05D010624 5.5e-09 65.5 64 51.6
Psat5g113560 Pisum sativum HOM05D009845 ORTHO05D010624 7.2e-09 65.1 53 56.6
Ca_16215_v3 Cicer arietinum L. HOM05D009845 ORTHO05D010624 2.7e-08 63.2 76 46.1
Medtr3g078610 Medicago truncatula HOM05D009845 ORTHO05D010624 1.4e-07 60.8 104 37.5
Lj1g0026374 Lotus japonicus HOM05D009845 ORTHO05D010624 5.2e-07 58.9 53 52.8
Phvul.009G182700 Phaseolus vulgaris HOM05D009845 ORTHO05D010624 5.2e-07 58.9 58 48.3
Glyma.04G178000 Glycine max HOM05D009845 ORTHO05D010624 2.0e-06 57.0 162 27.8
Glyma.04G178200 Glycine max HOM05D009845 ORTHO05D010624 4.4e-06 55.8 162 28.4
Lalb_Chr23g0273071 Lupinus albus HOM05D009845 ORTHO05D010624 9.8e-06 54.7 60 46.7


User provided reference genes

Program Settings