Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 3.1e-75 285.0 142 100.0
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 2.5e-32 142.5 149 53.0
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 1.0e-30 137.1 144 53.5
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 1.5e-29 133.3 150 50.7
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 6.3e-28 127.9 144 52.1
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 8.2e-28 127.5 146 50.0
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 9.1e-27 124.0 143 49.7
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 5.9e-26 121.3 147 52.4
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 1.7e-25 119.8 143 51.0
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 3.8e-25 118.6 144 50.0
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.1e-24 117.1 149 50.3
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 5.5e-24 114.8 146 47.9
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 2.7e-23 112.5 141 48.9
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.0e-22 110.5 151 46.4
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 5.2e-22 108.2 123 50.4
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.2e-21 107.1 138 48.6
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 1.5e-21 106.7 121 50.4
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 2.0e-21 106.3 116 52.6
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 3.4e-21 105.5 139 46.8
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 7.5e-21 104.4 143 46.2
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.3e-20 103.6 141 48.9
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 1.7e-20 103.2 140 49.3
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 2.2e-20 102.8 150 46.7
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 2.2e-20 102.8 145 49.7
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 2.8e-20 102.4 124 51.6
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 6.3e-20 101.3 125 49.6
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 4.1e-19 98.6 148 45.9
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 5.4e-19 98.2 149 42.3
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 7.0e-19 97.8 145 46.2
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 1.6e-18 96.7 129 48.8
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 2.0e-18 96.3 142 45.1
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 2.0e-18 96.3 148 41.2
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 2.0e-18 96.3 141 45.4
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 5.9e-18 94.7 151 41.1
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 5.9e-18 94.7 152 38.2
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 1.0e-17 94.0 139 46.0
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 1.3e-17 93.6 146 42.5
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 1.3e-17 93.6 146 40.4
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 2.3e-17 92.8 126 50.0
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 3.8e-17 92.0 144 43.1
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 6.5e-17 91.3 161 36.6
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.5e-17 91.3 148 41.2
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 1.9e-16 89.7 162 40.7
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 2.5e-16 89.4 164 37.8
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 1.2e-15 87.0 142 43.0
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 3.6e-15 85.5 169 35.5
Migut.N00543 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.0e-14 84.0 133 39.8
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 1.8e-14 83.2 155 37.4
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 3.0e-14 82.4 169 36.1
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 3.0e-14 82.4 108 46.3
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 4.0e-14 82.0 165 37.6
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 4.0e-14 82.0 170 37.6
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 4.0e-14 82.0 116 44.8
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 5.2e-14 81.6 166 37.3
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 5.2e-14 81.6 140 36.4
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 8.9e-14 80.9 138 39.9
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 8.9e-14 80.9 121 41.3
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 2.0e-13 79.7 171 35.1
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 2.6e-13 79.3 128 36.7
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 2.6e-13 79.3 149 41.6
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 5.7e-13 78.2 133 41.4
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 7.5e-13 77.8 156 39.1
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 7.5e-13 77.8 144 40.3
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 7.5e-13 77.8 141 37.6
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 9.8e-13 77.4 156 39.1
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 9.8e-13 77.4 156 39.1
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 2.2e-12 76.3 156 39.1
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 3.7e-12 75.5 156 39.1
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 3.7e-12 75.5 144 37.5
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 4.9e-12 75.1 124 41.9
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 6.3e-12 74.7 163 35.0
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 3.1e-11 72.4 164 35.4
vmacro23199 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 4.1e-11 72.0 124 42.7
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 9.2e-11 70.9 168 32.1
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 1.2e-10 70.5 149 34.2
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 2.3e-09 66.2 136 36.0
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 5.0e-09 65.1 147 33.3
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 8.6e-09 64.3 117 37.6
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 1.6e-07 60.1 144 34.0
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.6e-07 60.1 147 32.0
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.6e-07 58.9 148 31.8
Aa31LG10G780 Aethionema arabicum HOM05D007392 ORTHO05D009181 6.1e-07 58.2 70 44.3
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 6.1e-07 58.2 150 35.3
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 1.0e-06 57.4 143 33.6
HPP92_026624 Vanilla planifolia HOM05D007392 ORTHO05D009181 1.0e-06 57.4 139 34.5
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 1.4e-06 57.0 113 37.2
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 1.4e-06 57.0 146 34.9
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 1.4e-06 57.0 148 32.4
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.8e-06 56.6 148 31.1
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.8e-06 56.6 148 31.1
HPP92_024836 Vanilla planifolia HOM05D007392 ORTHO05D009181 2.3e-06 56.2 139 34.5
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 3.0e-06 55.8 146 32.2
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 4.0e-06 55.5 148 30.4
Zm00001eb301030 Zea mays HOM05D029728 ORTHO05D009181 6.8e-06 54.7 61 49.2
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 8.9e-06 54.3 83 34.9
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 8.9e-06 54.3 136 30.1


User provided reference genes

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