Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 4.0e-90 334.7 168 100.0
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 3.6e-22 109.0 139 53.2
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 2.0e-20 103.2 136 52.2
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 2.6e-20 102.8 144 47.9
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 7.5e-20 101.3 136 47.8
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 3.7e-19 99.0 145 47.6
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 8.3e-19 97.8 136 48.5
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.1e-18 97.4 135 46.7
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 1.4e-18 97.1 136 47.8
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 5.4e-18 95.1 148 45.9
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 1.6e-17 93.6 141 44.7
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 5.9e-17 91.7 139 43.2
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 1.3e-16 90.5 142 43.0
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 5.0e-16 88.6 120 47.5
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 8.6e-16 87.8 149 41.6
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 1.5e-15 87.0 118 49.2
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 4.3e-15 85.5 120 50.0
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 4.3e-15 85.5 124 48.4
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 5.6e-15 85.1 137 43.8
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 7.3e-15 84.7 122 49.2
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 1.6e-14 83.6 126 49.2
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.0e-13 80.9 139 42.4
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 1.4e-13 80.5 127 45.7
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 1.8e-13 80.1 142 42.3
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 5.2e-13 78.6 149 38.9
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.5e-12 77.0 138 44.2
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 2.2e-11 73.2 133 43.6
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 2.2e-11 73.2 138 41.3
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 2.9e-11 72.8 138 38.4
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 3.7e-11 72.4 135 41.5
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 4.9e-11 72.0 139 38.1
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 8.3e-11 71.2 145 36.6
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.1e-10 70.9 138 39.1
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 3.2e-10 69.3 126 38.9
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 4.1e-10 68.9 140 41.4
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 4.1e-10 68.9 137 40.1
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 5.4e-10 68.6 130 36.9
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 7.0e-10 68.2 136 37.5
Migut.N00543 Erythranthe guttata HOM05D007392 ORTHO05D009181 9.2e-10 67.8 124 39.5
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 9.2e-10 67.8 138 39.9
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.2e-09 67.4 135 37.8
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 2.0e-09 66.6 126 43.7
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 7.8e-09 64.7 159 35.8
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 7.8e-09 64.7 151 37.7
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 1.0e-08 64.3 132 37.1
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.7e-08 63.5 146 37.7
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 1.7e-08 63.5 116 40.5
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 3.0e-08 62.8 132 39.4
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 8.6e-08 61.2 132 37.1
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 8.6e-08 61.2 107 43.9
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 1.5e-07 60.5 137 36.5
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 5.6e-07 58.5 131 37.4
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 5.6e-07 58.5 161 36.0
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 5.6e-07 58.5 149 34.2
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 2.1e-06 56.6 163 33.1
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 2.1e-06 56.6 152 32.2
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 2.1e-06 56.6 120 40.0
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 3.6e-06 55.8 167 33.5
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 4.7e-06 55.5 146 33.6
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 8.0e-06 54.7 130 37.7


User provided reference genes

Program Settings