Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03305 Striga asiatica HOM05D037617 ORTHO05D399366 3.8e-51 204.5 101 100.0
SGA_v2.0_scaffold23G09991 Striga asiatica HOM05D037617 ORTHO05D404903 5.1e-48 194.1 101 93.1
SGA_v2.0_scaffold45G17264 Striga asiatica HOM05D037617 ORTHO05D400462 5.3e-37 157.5 96 85.4
SGA_v2.0_scaffold60G21023 Striga asiatica HOM05D003903 ORTHO05D004828 7.2e-10 67.4 41 75.6
TWI53G1511 Tripterygium wilfordii HOM05D003903 ORTHO05D004828 2.6e-07 58.9 40 62.5
Cc02_g06790 Coffea canephora HOM05D003903 ORTHO05D004828 3.3e-07 58.5 40 62.5
Manes.07G126900 Manihot esculenta HOM05D003903 ORTHO05D004828 7.5e-07 57.4 40 57.5
Rhsim03G0141400 Rhododendron simsii HOM05D003903 ORTHO05D004828 7.5e-07 57.4 40 57.5
TWI73G0235 Tripterygium wilfordii HOM05D003903 ORTHO05D004828 9.7e-07 57.0 40 60.0
Manes.10G016200 Manihot esculenta HOM05D003903 ORTHO05D004828 1.3e-06 56.6 40 57.5
Sabra10G0147300 Salix brachista HOM05D003903 ORTHO05D004828 1.3e-06 56.6 40 57.5
MSTRG.8967 Avicennia marina HOM05D003903 ORTHO05D004828 2.2e-06 55.8 40 55.0
Actinidia29686 Actinidia chinensis HOM05D003903 ORTHO05D004828 2.8e-06 55.5 40 55.0
Glyma.11G228100 Glycine max HOM05D003903 ORTHO05D004828 2.8e-06 55.5 40 57.5
Glyma.18G029300 Glycine max HOM05D003903 ORTHO05D004828 3.7e-06 55.1 40 57.5
PSO339G1420 Papaver somniferum HOM05D003903 ORTHO05D004828 3.7e-06 55.1 40 55.0
VMungo0647G1175 Vigna mungo HOM05D003903 ORTHO05D004828 3.7e-06 55.1 40 60.0
Eucgr.G03040 Eucalyptus grandis HOM05D003903 ORTHO05D004828 4.8e-06 54.7 56 48.2
Gohir.A10G233600 Gossypium hirsutum HOM05D003903 ORTHO05D004828 4.8e-06 54.7 40 57.5
Peaxi162Scf01313g00013 Petunia axillaris HOM05D003903 ORTHO05D004828 4.8e-06 54.7 39 56.4
MSTRG.27342 Avicennia marina HOM05D003903 ORTHO05D004828 6.3e-06 54.3 40 52.5
Ca_17155_v3 Cicer arietinum L. HOM05D003903 ORTHO05D004828 6.3e-06 54.3 40 52.5
Nn2g11424 Nelumbo nucifera HOM05D003903 ORTHO05D004828 6.3e-06 54.3 41 53.7
GSVIVG01032858001 Vitis vinifera HOM05D003903 ORTHO05D004828 6.3e-06 54.3 40 57.5
BraA03t11470Z Brassica rapa HOM05D003903 ORTHO05D004828 8.2e-06 53.9 40 50.0
Cfa001353 Carpinus fangiana HOM05D003903 ORTHO05D004828 8.2e-06 53.9 38 55.3
Haze_17196 Corylus avellana HOM05D003903 ORTHO05D004828 8.2e-06 53.9 38 55.3
Dinv34412 Davidia involucrata HOM05D003903 ORTHO05D004828 8.2e-06 53.9 40 52.5
Duzib128G1594 Durio zibethinus HOM05D003903 ORTHO05D004828 8.2e-06 53.9 40 55.0
Glyma.14G061200 Glycine max HOM05D003903 ORTHO05D004828 8.2e-06 53.9 58 44.8
Gohir.D10G245900 Gossypium hirsutum HOM05D003903 ORTHO05D004828 8.2e-06 53.9 39 59.0
Gorai.011G283600 Gossypium raimondii HOM05D003903 ORTHO05D004828 8.2e-06 53.9 39 59.0
Lj1P952T30 Lonicera japonica HOM05D003903 ORTHO05D004828 8.2e-06 53.9 40 52.5
MD07G1215700 Malus domestica HOM05D003903 ORTHO05D004828 8.2e-06 53.9 40 52.5
Thecc.10G023200 Theobroma cacao HOM05D003903 ORTHO05D004828 8.2e-06 53.9 40 55.0


User provided reference genes

Program Settings