Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 1.4e-99 366.3 190 100.0
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.1e-72 276.9 188 75.0
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 9.5e-72 273.9 196 72.4
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 1.8e-70 269.6 189 72.5
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 4.0e-70 268.5 189 72.0
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.2e-69 266.9 177 74.6
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 2.6e-69 265.8 185 70.3
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 6.4e-68 261.2 188 70.2
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.4e-68 261.2 181 71.3
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 6.4e-68 261.2 193 68.9
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 8.4e-68 260.8 184 71.2
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 1.1e-67 260.4 203 67.5
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.2e-66 256.9 195 68.7
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 4.6e-66 255.0 192 70.3
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.6e-65 251.1 215 61.4
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.6e-63 246.5 179 68.7
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.8e-62 243.0 201 65.7
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 5.2e-62 241.5 202 63.4
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.2e-61 240.4 194 64.4
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 5.8e-61 238.0 204 63.2
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 7.6e-61 237.7 196 63.3
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 4.9e-60 235.0 187 64.7
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 4.9e-60 235.0 204 61.8
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 6.4e-60 234.6 168 69.6
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 6.4e-60 234.6 192 63.0
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.4e-59 233.4 186 66.7
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 1.4e-59 233.4 172 68.6
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.9e-59 233.0 186 66.1
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.9e-59 233.0 186 66.7
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.9e-59 233.0 184 64.1
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 2.4e-59 232.6 186 65.6
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 2.4e-59 232.6 175 66.9
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 1.2e-58 230.3 201 60.7
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 6.0e-58 228.0 176 65.3
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 1.0e-57 227.3 162 70.4
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 2.3e-57 226.1 252 53.2
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 3.0e-57 225.7 206 60.2
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 3.9e-57 225.3 196 60.2
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 5.1e-57 224.9 186 63.4
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 8.7e-57 224.2 188 62.2
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 1.9e-56 223.0 191 62.3
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 2.5e-56 222.6 169 68.0
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 2.5e-56 222.6 196 59.7
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 3.3e-56 222.2 196 58.7
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 3.3e-56 222.2 168 65.5
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 9.6e-56 220.7 193 62.2
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.3e-55 220.3 202 58.4
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.6e-55 219.9 202 58.4
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.6e-55 219.9 202 58.4
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 1.6e-55 219.9 179 64.8
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.6e-55 219.9 187 65.2
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 8.1e-55 217.6 221 55.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 1.8e-54 216.5 198 57.6
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 2.4e-54 216.1 178 60.7
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 3.1e-54 215.7 179 62.0
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 6.9e-54 214.5 173 59.5
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.2e-53 213.8 179 61.5
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 1.2e-53 213.8 205 57.1
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.2e-53 213.8 202 56.9
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 2.6e-53 212.6 189 59.8
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 5.8e-53 211.5 197 57.9
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 7.6e-53 211.1 202 57.9
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 9.9e-53 210.7 175 58.9
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 1.7e-52 209.9 205 55.6
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 2.9e-52 209.1 184 63.6
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 3.8e-52 208.8 191 59.2
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 8.4e-52 207.6 194 57.7
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 1.6e-50 203.4 200 53.5
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 2.1e-50 203.0 200 57.0
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 2.7e-50 202.6 183 56.8
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 2.7e-50 202.6 173 60.7
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.3e-49 200.3 177 58.2
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 2.3e-49 199.5 203 53.2
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 5.1e-49 198.4 200 55.5
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 6.6e-49 198.0 162 60.5
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.5e-48 196.8 195 53.3
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 1.5e-48 196.8 177 57.6
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 7.3e-48 194.5 164 60.4
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.3e-47 193.7 174 60.9
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 3.6e-47 192.2 180 60.0
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 2.4e-46 189.5 197 52.8
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 5.3e-46 188.3 196 57.1
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 7.6e-45 184.5 163 62.6
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 2.9e-44 182.6 176 54.0
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 4.9e-44 181.8 163 62.0
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 6.4e-44 181.4 158 58.2
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 1.1e-43 180.6 116 77.6
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 2.4e-43 179.5 166 59.6
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 5.5e-43 178.3 192 55.2
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 7.1e-43 177.9 166 59.0
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 9.3e-43 177.6 194 55.7
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 9.3e-43 177.6 166 60.2
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 9.3e-43 177.6 164 56.7
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 6.0e-42 174.9 164 57.9
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 6.0e-42 174.9 152 59.2
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 1.8e-41 173.3 167 58.7
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 3.0e-41 172.6 164 57.3
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 3.0e-41 172.6 164 57.3
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 3.9e-41 172.2 167 58.1
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 5.1e-41 171.8 168 53.0
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 1.1e-40 170.6 167 52.1
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 1.5e-40 170.2 194 53.1
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 1.5e-40 170.2 194 53.1
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 1.6e-39 166.8 166 55.4
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.3e-36 157.1 166 55.4
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 6.0e-34 148.3 164 53.0
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 2.5e-32 142.9 182 44.0
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 3.7e-31 139.0 103 69.9
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 5.9e-29 131.7 86 72.1
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.5e-27 126.3 126 54.0
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 5.9e-21 105.1 183 38.8
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 2.7e-18 96.3 208 33.2
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.0e-17 94.4 98 55.1
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 5.7e-16 88.6 176 33.0
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 8.2e-15 84.7 113 41.6
SMO337G0092 Selaginella moellendorffii HOM05D006799 ORTHO05D008391 5.7e-08 62.0 178 26.4
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 2.8e-07 59.7 39 66.7


User provided reference genes

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