Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03215 Striga asiatica HOM05D006433 ORTHO05D005382 1.0e-137 493.4 255 100.0
SalBow2G0414 Salvia bowleyana HOM05D006433 ORTHO05D005382 1.4e-25 120.9 246 38.6
Solyc04g009305.1 Solanum lycopersicum HOM05D006433 ORTHO05D005382 7.9e-21 105.1 295 33.6
PGSC0003DMG400032563 Solanum tuberosum HOM05D006433 ORTHO05D005382 1.8e-20 104.0 295 29.5
Nitab4.5_0005356g0050 Nicotiana tabacum HOM05D006433 ORTHO05D005382 1.1e-19 101.3 172 37.2
MSTRG.13683 Avicennia marina HOM05D006433 ORTHO05D005382 1.1e-17 94.7 232 34.1
Actinidia13713 Actinidia chinensis HOM05D006433 ORTHO05D005382 3.1e-17 93.2 131 41.2
DCAR_002584 Daucus carota HOM05D006433 ORTHO05D005382 2.6e-16 90.1 157 38.2
TAR371G0604 Trochodendron aralioides HOM05D006433 ORTHO05D005382 3.4e-16 89.7 123 39.0
Duzib132G0593 Durio zibethinus HOM05D006433 ORTHO05D005382 4.5e-16 89.4 222 33.8
Sopen04g004420 Solanum pennellii HOM05D006433 ORTHO05D005382 1.7e-15 87.4 125 39.2
Actinidia38416 Actinidia chinensis HOM05D006433 ORTHO05D005382 2.9e-15 86.7 190 35.8
Lsat_1_v5_gn_3_35360 Lactuca sativa HOM05D006433 ORTHO05D005382 2.9e-15 86.7 120 40.0
Nitab4.5_0002132g0010 Nicotiana tabacum HOM05D006433 ORTHO05D005382 2.9e-15 86.7 202 31.7
Gohir.D02G188100 Gossypium hirsutum HOM05D006433 ORTHO05D005382 3.8e-15 86.3 165 35.2
PGR142G2540 Punica granatum HOM05D006433 ORTHO05D005382 3.8e-15 86.3 117 41.0
ECA246G5167 Erigeron canadensis HOM05D006433 ORTHO05D005382 1.1e-14 84.7 246 31.7
Glyma.09G282600 Glycine max HOM05D006433 ORTHO05D005382 1.1e-14 84.7 123 38.2
Cfa008752 Carpinus fangiana HOM05D006433 ORTHO05D005382 4.2e-14 82.8 221 30.8
Thecc.02G159800 Theobroma cacao HOM05D006433 ORTHO05D005382 4.2e-14 82.8 216 31.0
COL.COLO4_03341 Corchorus olitorius HOM05D006433 ORTHO05D005382 5.5e-14 82.4 237 31.2
Gorai.005G210800 Gossypium raimondii HOM05D006433 ORTHO05D005382 7.1e-14 82.0 223 30.0
FAN17G1725 Fragaria x ananassa HOM05D006433 ORTHO05D005382 9.3e-14 81.6 98 43.9
RcHm_v2.0_Chr4g0446731 Rosa chinensis HOM05D006433 ORTHO05D005382 1.6e-13 80.9 141 35.5
arahy.Tifrunner.gnm1.ann1.0GGX7L Arachis hypogaea HOM05D006433 ORTHO05D005382 2.1e-13 80.5 93 40.9
Nitab4.5_0000771g0160 Nicotiana tabacum HOM05D006433 ORTHO05D005382 2.1e-13 80.5 142 35.9
Gohir.A03G164900 Gossypium hirsutum HOM05D006433 ORTHO05D005382 3.5e-13 79.7 165 33.9
CiPaw.06G061400 Carya illinoinensis HOM05D006433 ORTHO05D005382 4.6e-13 79.3 121 40.5
FvH4_4g36960 Fragaria vesca HOM05D006433 ORTHO05D005382 6.0e-13 79.0 93 44.1
FAN12G0758 Fragaria x ananassa HOM05D006433 ORTHO05D005382 6.0e-13 79.0 93 44.1
Lj6A717T151 Lonicera japonica HOM05D006433 ORTHO05D005382 6.0e-13 79.0 237 32.5
Haze_11768 Corylus avellana HOM05D006433 ORTHO05D005382 1.0e-12 78.2 223 30.5
Duzib248G0841 Durio zibethinus HOM05D006433 ORTHO05D005382 1.0e-12 78.2 271 28.8
Eucgr.G02576 Eucalyptus grandis HOM05D006433 ORTHO05D005382 1.0e-12 78.2 78 47.4
TPR.G39976 Trifolium pratense HOM05D006433 ORTHO05D005382 1.0e-12 78.2 251 23.9
arahy.Tifrunner.gnm1.ann1.X1AWTF Arachis hypogaea HOM05D006433 ORTHO05D005382 1.8e-12 77.4 99 37.4
FAN07G1145 Fragaria x ananassa HOM05D006433 ORTHO05D005382 1.8e-12 77.4 139 36.0
Medtr1g037520 Medicago truncatula HOM05D006433 ORTHO05D005382 1.8e-12 77.4 107 37.4
Prupe.1G347600 Prunus persica HOM05D006433 ORTHO05D005382 1.8e-12 77.4 83 44.6
Cc11_g02400 Coffea canephora HOM05D006433 ORTHO05D005382 2.3e-12 77.0 180 33.3
CiPaw.05G169900 Carya illinoinensis HOM05D006433 ORTHO05D005382 3.9e-12 76.3 223 29.1
Ciclev10031878m.g Citrus clementina HOM05D006433 ORTHO05D005382 3.9e-12 76.3 243 30.5
MBI03_g09362_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 3.9e-12 76.3 283 27.9
Potri.005G092400 Populus trichocarpa HOM05D006433 ORTHO05D005382 3.9e-12 76.3 127 36.2
MD13G1005200 Malus domestica HOM05D006433 ORTHO05D005382 5.1e-12 75.9 89 41.6
Sabra05G0076500 Salix brachista HOM05D006433 ORTHO05D005382 6.7e-12 75.5 102 42.2
TWI74G1071 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 6.7e-12 75.5 115 38.3
Potri.007G071900 Populus trichocarpa HOM05D006433 ORTHO05D005382 1.1e-11 74.7 77 45.5
arahy.Tifrunner.gnm1.ann1.48DCIV Arachis hypogaea HOM05D056638 ORTHO05D005382 1.5e-11 74.3 105 37.1
Sabra07G0060600 Salix brachista HOM05D006433 ORTHO05D005382 1.9e-11 73.9 124 33.1
Migut.E00694 Erythranthe guttata HOM05D006433 ORTHO05D005382 2.5e-11 73.6 81 46.9
CARHR204930 Cardamine hirsuta HOM05D006433 ORTHO05D005382 3.3e-11 73.2 81 42.0
DCAR_026896 Daucus carota HOM05D006433 ORTHO05D005382 3.3e-11 73.2 256 27.3
Thhalv10005318m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 3.3e-11 73.2 110 38.2
BolC2t12149H Brassica oleracea HOM05D006433 ORTHO05D005382 4.3e-11 72.8 93 40.9
MD16G1002700 Malus domestica HOM05D006433 ORTHO05D005382 4.3e-11 72.8 109 38.5
TWI77G0994 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 4.3e-11 72.8 263 28.9
BcaC03g18036 Brassica carinata HOM05D006433 ORTHO05D005382 5.7e-11 72.4 93 40.9
Thhalv10014452m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 5.7e-11 72.4 104 36.5
AT5G23160 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 7.4e-11 72.0 266 28.9
Lj2g0006429 Lotus japonicus HOM05D006433 ORTHO05D005382 7.4e-11 72.0 244 27.0
TAR011G0003 Trochodendron aralioides HOM05D008701 ORTHO05D010238 9.6e-11 71.6 84 39.3
MBI06_g16016_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 1.3e-10 71.2 293 25.3
Actinidia09967 Actinidia chinensis HOM05D006433 ORTHO05D005382 1.6e-10 70.9 77 42.9
Aa31LG11G2650 Aethionema arabicum HOM05D006433 ORTHO05D005382 2.1e-10 70.5 130 33.8
C02p61000 Brassica napus HOM05D006433 ORTHO05D005382 2.1e-10 70.5 92 40.2
TAR626G1447 Trochodendron aralioides HOM05D008701 ORTHO05D010238 2.8e-10 70.1 84 38.1
AL6G18640 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 3.7e-10 69.7 106 34.9
AT5G08240 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 3.7e-10 69.7 106 36.8
Gohir.D12G137000 Gossypium hirsutum HOM05D006433 ORTHO05D005382 4.8e-10 69.3 122 38.5
Psat6g135800 Pisum sativum HOM05D006433 ORTHO05D005382 4.8e-10 69.3 139 30.9
C09p68700 Brassica napus HOM05D006433 ORTHO05D005382 6.3e-10 68.9 81 37.0
BolC9t59616H Brassica oleracea HOM05D006433 ORTHO05D005382 6.3e-10 68.9 81 37.0
Cpa.g.sc0.139 Carica papaya HOM05D006433 ORTHO05D005382 6.3e-10 68.9 277 27.1
BcaB07g29865 Brassica carinata HOM05D006433 ORTHO05D005382 8.2e-10 68.6 219 25.1
BraA02t09057Z Brassica rapa HOM05D006433 ORTHO05D005382 8.2e-10 68.6 241 27.0
Lalb_Chr10g0094961 Lupinus albus HOM05D006433 ORTHO05D005382 8.2e-10 68.6 129 34.9
A10p28440 Brassica napus HOM05D006433 ORTHO05D005382 1.4e-09 67.8 108 33.3
BraA10t44892Z Brassica rapa HOM05D006433 ORTHO05D005382 1.4e-09 67.8 108 33.3
Carub.0006s0712 Capsella rubella HOM05D006433 ORTHO05D005382 1.8e-09 67.4 101 37.6
TAR629G0072 Trochodendron aralioides HOM05D006433 ORTHO05D005382 2.4e-09 67.0 278 24.8
Potri.001G408900 Populus trichocarpa HOM05D006433 ORTHO05D005382 3.1e-09 66.6 78 37.2
CANSAT56G2818 Cannabis sativa HOM05D006433 ORTHO05D005382 4.1e-09 66.2 152 32.2
Glyma.20G002800 Glycine max HOM05D006433 ORTHO05D005382 4.1e-09 66.2 84 38.1
DCAR_025546 Daucus carota HOM05D006433 ORTHO05D005382 6.9e-09 65.5 77 37.7
Phvul.003G005000 Phaseolus vulgaris HOM05D006433 ORTHO05D005382 6.9e-09 65.5 78 38.5
QL03p044176 Quercus lobata HOM05D006433 ORTHO05D005382 6.9e-09 65.5 73 42.5
Gohir.A12G133500 Gossypium hirsutum HOM05D006433 ORTHO05D005382 9.0e-09 65.1 272 28.7
Nn1g03826 Nelumbo nucifera HOM05D008701 ORTHO05D005382 2.6e-08 63.5 79 35.4
A02p41140 Brassica napus HOM05D006433 ORTHO05D005382 3.4e-08 63.2 235 26.4
Sabra16G0271700 Salix brachista HOM05D006433 ORTHO05D005382 3.4e-08 63.2 172 29.7
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 3.4e-08 63.2 172 29.7
Gorai.008G148300 Gossypium raimondii HOM05D006433 ORTHO05D005382 4.5e-08 62.8 284 26.1
Manes.03G007400 Manihot esculenta HOM05D006433 ORTHO05D005382 5.8e-08 62.4 231 26.8
Sp6g34710 Schrenkiella parvula HOM05D006433 ORTHO05D005382 7.6e-08 62.0 128 30.5
MELO3C023593.2 Cucumis melo HOM05D027220 ORTHO05D005382 2.9e-07 60.1 254 25.2
ATR0618G439 Amborella trichopoda HOM05D006433 ORTHO05D005382 3.8e-07 59.7 240 25.4
Aa31LG3G18330 Aethionema arabicum HOM05D006433 ORTHO05D005382 5.0e-07 59.3 83 36.1
Dinv08359 Davidia involucrata HOM05D012187 ORTHO05D005382 6.5e-07 58.9 236 25.0
VMungo0251G3481 Vigna mungo HOM05D006433 ORTHO05D005382 6.5e-07 58.9 225 24.0
AL6G34350 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 8.4e-07 58.5 264 26.9
ClCG09G004510 Citrullus lanatus HOM05D027220 ORTHO05D005382 8.4e-07 58.5 210 28.6
Manes.11G107400 Manihot esculenta HOM05D006433 ORTHO05D005382 8.4e-07 58.5 223 26.9
CARHR190370 Cardamine hirsuta HOM05D006433 ORTHO05D005382 1.1e-06 58.2 255 26.3
Oeu063832.1 Olea europaea HOM05D006433 ORTHO05D005382 1.1e-06 58.2 79 40.5
SEGI_06945 Sequoiadendron giganteum HOM05D020619 ORTHO05D005382 1.1e-06 58.2 147 27.9
Carub.0006s2095 Capsella rubella HOM05D006433 ORTHO05D005382 1.9e-06 57.4 183 29.0
TAR624G0030 Trochodendron aralioides HOM05D008701 ORTHO05D010238 2.5e-06 57.0 138 27.5
TAR624G0398 Trochodendron aralioides HOM05D008701 ORTHO05D010238 2.5e-06 57.0 138 27.5
AUR62032989 Chenopodium quinoa HOM05D006433 ORTHO05D005382 5.5e-06 55.8 271 25.1
Dinv02575 Davidia involucrata HOM05D008701 ORTHO05D028399 9.3e-06 55.1 104 29.8
Duzib213G0120 Durio zibethinus HOM05D013385 ORTHO05D005382 9.3e-06 55.1 87 31.0
Migut.H01894 Erythranthe guttata HOM05D012187 ORTHO05D005382 9.3e-06 55.1 124 35.5
TWI39G0991 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 9.3e-06 55.1 184 26.1
HPP92_007311 Vanilla planifolia HOM05D049803 ORTHO05D051563 9.3e-06 55.1 70 40.0


User provided reference genes

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