Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03192 Striga asiatica HOM05D000257 ORTHO05D008537 1.6e-54 215.7 101 100.0
SGA_v2.0_scaffold6G03201 Striga asiatica HOM05D000257 ORTHO05D008537 4.9e-43 177.6 82 100.0
Dinv26364 Davidia involucrata HOM05D000257 ORTHO05D008537 3.7e-38 161.4 81 87.7
Hma1.2p1_0105F.1_g050820 Hydrangea macrophylla HOM05D000257 ORTHO05D008537 1.8e-37 159.1 83 85.5
Cpa.g.sc21.189 Carica papaya HOM05D000257 ORTHO05D008537 3.1e-37 158.3 81 84.0
Gorai.005G079400 Gossypium raimondii HOM05D000257 ORTHO05D008537 5.3e-37 157.5 80 85.0
Duzib041G0286 Durio zibethinus HOM05D000257 ORTHO05D008537 9.0e-37 156.8 81 86.4
MSTRG.560 Avicennia marina HOM05D000257 ORTHO05D008537 1.5e-36 156.0 82 85.4
Gohir.A02G064400 Gossypium hirsutum HOM05D000257 ORTHO05D008537 2.6e-36 155.2 80 82.5
PGR042G3587 Punica granatum HOM05D000257 ORTHO05D008537 3.4e-36 154.8 81 84.0
CAN.G905.15 Capsicum annuum HOM05D000257 ORTHO05D008537 4.5e-36 154.5 81 82.7
DCAR_016345 Daucus carota HOM05D000257 ORTHO05D008537 4.5e-36 154.5 81 85.2
Manes.13G038100 Manihot esculenta HOM05D000257 ORTHO05D008537 4.5e-36 154.5 81 85.2
COL.COLO4_37838 Corchorus olitorius HOM05D000257 ORTHO05D008537 5.9e-36 154.1 81 84.0
TAR381G1141 Trochodendron aralioides HOM05D000257 ORTHO05D008537 5.9e-36 154.1 83 81.9
CiPaw.16G013600 Carya illinoinensis HOM05D000257 ORTHO05D008537 1.0e-35 153.3 81 82.7
ECA246G2106 Erigeron canadensis HOM05D000257 ORTHO05D008537 1.3e-35 152.9 81 81.5
Nitab4.5_0000032g0050 Nicotiana tabacum HOM05D000257 ORTHO05D008537 1.3e-35 152.9 81 82.7
Solyc04g071290.4 Solanum lycopersicum HOM05D000257 ORTHO05D008537 1.3e-35 152.9 81 82.7
PGSC0003DMG400008616 Solanum tuberosum HOM05D000257 ORTHO05D008537 1.3e-35 152.9 81 82.7
Nitab4.5_0004790g0030 Nicotiana tabacum HOM05D000257 ORTHO05D008537 2.2e-35 152.1 81 81.5
Oeu031093.1 Olea europaea HOM05D000257 ORTHO05D008537 2.2e-35 152.1 81 84.0
Nn5g28718 Nelumbo nucifera HOM05D000257 ORTHO05D008537 2.9e-35 151.8 83 81.9
Peaxi162Scf00765g00018 Petunia axillaris HOM05D000257 ORTHO05D008537 3.8e-35 151.4 81 80.2
Sopen04g027240 Solanum pennellii HOM05D000257 ORTHO05D008537 3.8e-35 151.4 81 81.5
Cc10_g14720 Coffea canephora HOM05D000257 ORTHO05D008537 5.0e-35 151.0 81 80.2
Rhsim06G0026600 Rhododendron simsii HOM05D000257 ORTHO05D008537 5.0e-35 151.0 81 81.5
SalBow7G3302 Salvia bowleyana HOM05D000257 ORTHO05D008537 5.0e-35 151.0 82 81.7
vmacro21699 Vaccinium macrocarpon HOM05D000257 ORTHO05D008537 5.0e-35 151.0 81 81.5
CSS0036500 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D008537 6.5e-35 150.6 81 82.7
Aa31LG11G14010 Aethionema arabicum HOM05D000257 ORTHO05D008537 8.4e-35 150.2 81 79.0
ClCG08G006950 Citrullus lanatus HOM05D000257 ORTHO05D008537 8.4e-35 150.2 81 81.5
THA.LOC104816759 Tarenaya hassleriana HOM05D000257 ORTHO05D008537 8.4e-35 150.2 81 80.2
Lsat_1_v5_gn_5_89920 Lactuca sativa HOM05D000257 ORTHO05D008537 1.1e-34 149.8 83 77.1
CsaV3_1G019690 Cucumis sativus L. HOM05D000257 ORTHO05D008537 1.4e-34 149.4 81 80.2
CsaV3_6G005280 Cucumis sativus L. HOM05D000257 ORTHO05D008537 1.4e-34 149.4 81 80.2
Potri.005G191100 Populus trichocarpa HOM05D000257 ORTHO05D008537 1.4e-34 149.4 81 81.5
QL02p073939 Quercus lobata HOM05D000257 ORTHO05D008537 1.9e-34 149.1 81 80.2
MELO3C008345.2 Cucumis melo HOM05D000257 ORTHO05D008537 2.5e-34 148.7 81 80.2
MBI19_g25017_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D008537 2.5e-34 148.7 83 77.1
MD05G1023500 Malus domestica HOM05D000257 ORTHO05D008537 2.5e-34 148.7 83 78.3
Atru.chr13.2156 Acer truncatum HOM05D000257 ORTHO05D008537 3.2e-34 148.3 84 79.8
Migut.H02335 Erythranthe guttata HOM05D000257 ORTHO05D008537 3.2e-34 148.3 82 80.5
Prupe.8G028100 Prunus persica HOM05D000257 ORTHO05D008537 4.2e-34 147.9 81 79.0
Thhalv10027159m.g Eutrema salsugineum HOM05D000257 ORTHO05D008537 5.5e-34 147.5 80 77.5
AT2G31290 Arabidopsis thaliana HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 80.0
BcaC09g50458 Brassica carinata HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 77.5
A01p20110 Brassica napus HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 77.5
C01p25260 Brassica napus HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 77.5
BolC1t02476H Brassica oleracea HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 77.5
BraA01t01935Z Brassica rapa HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 77.5
Carub.0004s1258 Capsella rubella HOM05D000257 ORTHO05D008537 7.2e-34 147.1 80 80.0
Sabra05G0146000 Salix brachista HOM05D000257 ORTHO05D008537 7.2e-34 147.1 81 80.2
Sed0024568 Sechium edule HOM05D000257 ORTHO05D008537 7.2e-34 147.1 81 79.0
HanXRQChr05g0161571 Helianthus annuus HOM05D000257 ORTHO05D008537 9.3e-34 146.7 81 77.8
Aqoxy7G01167 Aquilegia oxysepala HOM05D000257 ORTHO05D008537 1.6e-33 146.0 83 77.1
AUR62013569 Chenopodium quinoa HOM05D000257 ORTHO05D008537 1.6e-33 146.0 81 79.0
AL4G26520 Arabidopsis lyrata HOM05D000257 ORTHO05D008537 2.1e-33 145.6 80 77.5
FvH4_2g13920 Fragaria vesca HOM05D000257 ORTHO05D008537 2.1e-33 145.6 81 77.8
FAN15G3320 Fragaria x ananassa HOM05D000257 ORTHO05D008537 2.1e-33 145.6 81 77.8
FAN24G0329 Fragaria x ananassa HOM05D000257 ORTHO05D008537 2.1e-33 145.6 81 77.8
FAN27G3100 Fragaria x ananassa HOM05D000257 ORTHO05D008537 2.1e-33 145.6 81 77.8
Sp7g16930 Schrenkiella parvula HOM05D000257 ORTHO05D008537 2.1e-33 145.6 80 77.5
Thecc.08G149700 Theobroma cacao HOM05D000257 ORTHO05D008537 2.1e-33 145.6 81 81.5
CARHR223930 Cardamine hirsuta HOM05D000257 ORTHO05D008537 2.7e-33 145.2 80 78.8
Haze_17745 Corylus avellana HOM05D000257 ORTHO05D008537 2.7e-33 145.2 81 80.2
EL10Ac3g05262 Beta vulgaris HOM05D000257 ORTHO05D008537 3.5e-33 144.8 81 80.2
Ciclev10001289m.g Citrus clementina HOM05D000257 ORTHO05D008537 4.6e-33 144.4 83 77.1
FAN20G0765 Fragaria x ananassa HOM05D000257 ORTHO05D008537 6.1e-33 144.1 81 77.8
Actinidia10654 Actinidia chinensis HOM05D000257 ORTHO05D008537 7.9e-33 143.7 81 79.0
Eucgr.B00887 Eucalyptus grandis HOM05D000257 ORTHO05D008537 7.9e-33 143.7 81 77.8
Eucgr.B00984 Eucalyptus grandis HOM05D000257 ORTHO05D008537 7.9e-33 143.7 81 77.8
BcaNung00107 Brassica carinata HOM05D000257 ORTHO05D008537 1.0e-32 143.3 81 77.8
AUR62026720 Chenopodium quinoa HOM05D000257 ORTHO05D008537 1.8e-32 142.5 81 76.5
Cfa018331 Carpinus fangiana HOM05D000257 ORTHO05D008537 2.3e-32 142.1 81 77.8
Ah.05g167850 Amaranthus hybridus HOM05D000257 ORTHO05D008537 3.0e-32 141.7 83 77.1
RcHm_v2.0_Chr6g0275671 Rosa chinensis HOM05D000257 ORTHO05D008537 3.0e-32 141.7 81 75.3
Actinidia17800 Actinidia chinensis HOM05D000257 ORTHO05D008537 5.1e-32 141.0 81 79.0
Lj7P371T36 Lonicera japonica HOM05D000257 ORTHO05D008537 6.7e-32 140.6 83 75.9
PSO541G3733 Papaver somniferum HOM05D000257 ORTHO05D008537 8.7e-32 140.2 82 78.0
Sc20g0003500 Simmondsia chinensis HOM05D000257 ORTHO05D008537 8.7e-32 140.2 81 74.1
unitig_0.g988 Utricularia gibba HOM05D000257 ORTHO05D008537 3.3e-31 138.3 82 74.4
Lalb_Chr06g0161541 Lupinus albus HOM05D000257 ORTHO05D008537 1.6e-30 136.0 83 75.9
ATR0772G102 Amborella trichopoda HOM05D000257 ORTHO05D008537 1.4e-29 132.9 81 71.6
Lj5g0018709 Lotus japonicus HOM05D000257 ORTHO05D008537 4.1e-29 131.3 82 76.8
arahy.Tifrunner.gnm1.ann1.49R5B9 Arachis hypogaea HOM05D000257 ORTHO05D008537 9.0e-29 130.2 99 63.6
arahy.Tifrunner.gnm1.ann1.2YI87A Arachis hypogaea HOM05D000257 ORTHO05D008537 7.7e-28 127.1 99 62.6
Glyma.10G225700 Glycine max HOM05D000257 ORTHO05D008537 1.7e-27 125.9 81 72.8
Gohir.D02G070350 Gossypium hirsutum HOM05D000257 ORTHO05D008537 1.7e-27 125.9 80 70.0
Ca_27731_v3 Cicer arietinum L. HOM05D000257 ORTHO05D008537 2.2e-27 125.6 81 74.1
VMungo0720G2143 Vigna mungo HOM05D000257 ORTHO05D008537 2.9e-27 125.2 100 60.0
Phvul.007G079300 Phaseolus vulgaris HOM05D000257 ORTHO05D008537 8.5e-27 123.6 81 71.6
Medtr1g019170 Medicago truncatula HOM05D000257 ORTHO05D008537 2.7e-25 118.6 80 70.0
Medtr3g029990 Medicago truncatula HOM05D000257 ORTHO05D008537 2.7e-25 118.6 80 70.0
Medtr1g098960 Medicago truncatula HOM05D000257 ORTHO05D008537 8.8e-24 113.6 80 68.8
Medtr3g448960 Medicago truncatula HOM05D000257 ORTHO05D008537 8.8e-24 113.6 80 68.8
SEGI_06680 Sequoiadendron giganteum HOM05D000257 ORTHO05D008537 2.0e-23 112.5 83 56.6
Zm00001eb187970 Zea mays HOM05D000257 ORTHO05D008537 7.7e-20 100.5 69 62.3
Os06g0265900 Oryza sativa ssp. japonica HOM05D000257 ORTHO05D008537 4.2e-18 94.7 64 60.9
HanXRQChr01g0001171 Helianthus annuus HOM05D000257 ORTHO05D008537 7.9e-17 90.5 52 69.2
Oeu023266.1 Olea europaea HOM05D000257 ORTHO05D008537 1.8e-13 79.3 41 80.5
Lsat_1_v5_gn_8_63320 Lactuca sativa HOM05D000257 ORTHO05D008537 5.0e-11 71.2 71 46.5


User provided reference genes

Program Settings