Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03157 Striga asiatica HOM05D006292 ORTHO05D006110 1.7e-60 235.7 110 100.0
Oeu017028.1 Olea europaea HOM05D006292 ORTHO05D006110 1.6e-15 86.3 110 46.4
SGA_v2.0_scaffold198G41102 Striga asiatica HOM05D006292 ORTHO05D006110 2.6e-13 79.0 124 44.4
MSTRG.12158 Avicennia marina HOM05D006292 ORTHO05D006110 3.4e-13 78.6 116 42.2
Peaxi162Scf00045g00010 Petunia axillaris HOM05D006292 ORTHO05D006110 1.9e-11 72.8 123 41.5
Hma1.2p1_1063F.1_g253570 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 9.3e-11 70.5 114 42.1
Hma1.2p1_2704F.1_g327130 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 1.2e-10 70.1 114 42.1
SalBow6G3663 Salvia bowleyana HOM05D006292 ORTHO05D006110 3.5e-10 68.6 86 50.0
vmacro00329 Vaccinium macrocarpon HOM05D006292 ORTHO05D006110 5.1e-09 64.7 116 42.2
Cc08_g02780 Coffea canephora HOM05D006292 ORTHO05D006110 8.7e-09 63.9 112 42.9
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 5.6e-08 61.2 114 38.6
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 5.6e-08 61.2 114 38.6
unitig_32.g10895 Utricularia gibba HOM05D006292 ORTHO05D006110 7.3e-08 60.8 110 40.9
Thhalv10001070m.g Eutrema salsugineum HOM05D011808 ORTHO05D006110 1.3e-07 60.1 121 33.9
Rhsim07G0127000 Rhododendron simsii HOM05D006292 ORTHO05D006110 1.3e-07 60.1 112 41.1
Aqoxy3G02346 Aquilegia oxysepala HOM05D006292 ORTHO05D006110 1.6e-07 59.7 113 38.9
PGSC0003DMG400001160 Solanum tuberosum HOM05D006292 ORTHO05D006110 1.6e-07 59.7 118 39.8
DCAR_005630 Daucus carota HOM05D006292 ORTHO05D006110 3.6e-07 58.5 56 55.4
Sopen08g001060 Solanum pennellii HOM05D006292 ORTHO05D006110 6.2e-07 57.8 118 39.0
Solyc08g005040.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 1.1e-06 57.0 118 37.3
AL8G11570 Arabidopsis lyrata HOM05D011808 ORTHO05D006110 1.4e-06 56.6 121 30.6
AT5G46770 Arabidopsis thaliana HOM05D011808 ORTHO05D006110 1.4e-06 56.6 77 36.4
Sed0015746 Sechium edule HOM05D006292 ORTHO05D006110 1.4e-06 56.6 116 36.2
Potri.003G092100 Populus trichocarpa HOM05D006292 ORTHO05D006110 3.1e-06 55.5 120 41.7
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 3.1e-06 55.5 113 38.1
Carub.0008s0115 Capsella rubella HOM05D011808 ORTHO05D006110 4.0e-06 55.1 77 36.4
CiPaw.12G063900 Carya illinoinensis HOM05D006292 ORTHO05D006110 6.9e-06 54.3 110 42.7
Rhsim11G0014800 Rhododendron simsii HOM05D006292 ORTHO05D006110 6.9e-06 54.3 117 38.5
ClCG10G001600 Citrullus lanatus HOM05D006292 ORTHO05D006110 9.0e-06 53.9 109 38.5
Psat2g135960 Pisum sativum HOM05D006292 ORTHO05D006110 9.0e-06 53.9 109 37.6


User provided reference genes

Program Settings