Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 2.0e-112 409.1 201 100.0
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 5.2e-68 261.5 173 79.2
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 2.4e-57 226.1 124 90.3
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 7.0e-49 198.0 123 76.4
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 3.5e-48 195.7 121 75.2
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 4.6e-48 195.3 123 73.2
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 6.0e-48 194.9 123 74.0
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 2.3e-47 193.0 123 74.0
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 2.3e-47 193.0 121 76.0
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 2.3e-47 193.0 123 72.4
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 2.3e-47 193.0 123 72.4
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 2.3e-47 193.0 123 74.8
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 5.0e-47 191.8 123 74.0
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 5.0e-47 191.8 121 74.4
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 6.6e-47 191.4 121 74.4
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 8.6e-47 191.0 123 74.0
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 1.1e-46 190.7 121 73.6
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 1.9e-46 189.9 121 73.6
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 4.3e-46 188.7 127 67.7
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 4.3e-46 188.7 120 74.2
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 5.6e-46 188.3 123 71.5
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 5.6e-46 188.3 123 71.5
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 5.6e-46 188.3 120 74.2
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 9.5e-46 187.6 121 72.7
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.6e-45 186.8 123 71.5
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.6e-45 186.8 123 71.5
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.6e-45 186.8 123 71.5
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 1.6e-45 186.8 123 71.5
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 1.6e-45 186.8 123 69.9
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 2.1e-45 186.4 123 72.4
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 2.1e-45 186.4 120 73.3
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 2.8e-45 186.0 121 71.9
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 2.8e-45 186.0 123 69.9
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 3.6e-45 185.7 123 71.5
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 3.6e-45 185.7 123 71.5
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 3.6e-45 185.7 121 72.7
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 4.7e-45 185.3 118 74.6
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 4.7e-45 185.3 120 72.5
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 4.7e-45 185.3 123 71.5
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 6.2e-45 184.9 120 72.5
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 8.0e-45 184.5 123 70.7
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 8.0e-45 184.5 121 71.9
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.1e-44 184.1 126 69.0
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 1.4e-44 183.7 127 66.9
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 1.8e-44 183.3 123 69.9
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.3e-44 183.0 123 69.9
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 2.3e-44 183.0 123 69.9
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 2.3e-44 183.0 121 68.6
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 3.1e-44 182.6 119 69.7
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 3.1e-44 182.6 121 71.1
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 4.0e-44 182.2 120 71.7
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 4.0e-44 182.2 123 69.9
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 6.8e-44 181.4 120 71.7
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 6.8e-44 181.4 123 71.5
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 1.2e-43 180.6 121 70.2
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 1.5e-43 180.3 120 70.0
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 1.5e-43 180.3 123 70.7
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.5e-43 180.3 120 70.8
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.6e-43 179.5 120 70.8
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 2.6e-43 179.5 121 71.9
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 7.5e-43 177.9 121 68.6
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 9.8e-43 177.6 121 69.4
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 1.3e-42 177.2 121 69.4
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.7e-42 176.8 123 65.9
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 2.2e-42 176.4 121 64.5
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 2.2e-42 176.4 120 69.2
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.2e-42 176.4 123 68.3
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 4.9e-42 175.3 120 68.3
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 6.4e-42 174.9 120 66.7
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 8.3e-42 174.5 120 66.7
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 8.3e-42 174.5 129 66.7
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 1.1e-41 174.1 121 68.6
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 1.1e-41 174.1 114 71.1
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.4e-41 173.7 121 69.4
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.4e-41 173.7 121 69.4
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 1.9e-41 173.3 123 65.9
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.9e-41 173.3 107 74.8
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 1.9e-41 173.3 114 71.9
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 1.9e-41 173.3 121 67.8
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 2.4e-41 172.9 120 66.7
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 3.2e-41 172.6 120 65.0
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 7.0e-41 171.4 121 66.1
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 7.0e-41 171.4 108 73.1
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 9.2e-41 171.0 120 68.3
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 9.2e-41 171.0 121 65.3
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 9.2e-41 171.0 120 67.5
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 1.2e-40 170.6 120 65.8
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 1.2e-40 170.6 114 69.3
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 1.2e-40 170.6 121 66.1
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 4.6e-40 168.7 120 65.8
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 6.0e-40 168.3 120 64.2
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 6.0e-40 168.3 111 72.1
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 6.0e-40 168.3 123 68.3
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 7.8e-40 167.9 120 66.7
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 1.7e-39 166.8 108 72.2
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 1.7e-39 166.8 104 72.1
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 3.9e-39 165.6 108 73.1
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 5.1e-39 165.2 106 72.6
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 8.6e-39 164.5 120 65.0
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 3.3e-38 162.5 105 72.4
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 4.3e-38 162.2 105 72.4
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 5.6e-38 161.8 133 60.2
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 5.6e-38 161.8 119 63.0
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 2.8e-37 159.5 108 69.4
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 3.6e-37 159.1 138 58.0
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.6e-37 159.1 106 71.7
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.6e-37 159.1 106 71.7
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 1.8e-36 156.8 105 70.5
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 1.8e-36 156.8 105 70.5
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 1.2e-35 154.1 105 66.7
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.5e-35 153.7 108 63.9
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 2.2e-34 149.8 115 61.7
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 2.9e-34 149.4 106 64.2
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 4.9e-34 148.7 128 57.8
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 4.1e-33 145.6 99 68.7
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 5.4e-33 145.2 105 63.8
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 7.8e-32 141.4 112 60.7
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 1.0e-31 141.0 105 62.9
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 3.0e-31 139.4 85 76.5
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 1.4e-28 130.6 105 61.0
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 1.4e-28 130.6 105 61.0
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 1.4e-28 130.6 105 61.0
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 4.2e-25 119.0 67 83.6
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 7.1e-25 118.2 93 55.9
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 7.1e-25 118.2 106 55.7
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 3.0e-23 112.8 112 47.3
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 2.5e-22 109.8 66 75.8
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 2.5e-22 109.8 120 47.5
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 3.4e-19 99.4 118 46.6
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 9.9e-19 97.8 110 42.7
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 1.9e-17 93.6 69 59.4
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 4.3e-14 82.4 52 73.1
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 2.1e-13 80.1 40 85.0
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 5.8e-11 72.0 55 56.4
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 3.2e-09 66.2 51 51.0
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 3.9e-07 59.3 41 68.3


User provided reference genes

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