Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 2.2e-268 928.3 441 100.0
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 9.5e-232 806.6 442 85.5
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.1e-227 793.1 442 84.4
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 7.3e-224 780.4 441 83.4
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 6.6e-217 757.3 437 80.8
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 5.6e-216 754.2 444 80.0
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 5.6e-216 754.2 437 80.5
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 1.2e-215 753.1 437 80.3
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 2.1e-215 752.3 437 80.5
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 3.6e-215 751.5 443 79.0
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 8.1e-215 750.4 442 79.9
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.1e-214 750.0 438 80.1
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.8e-214 749.2 435 80.7
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 6.4e-212 740.7 443 82.2
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 3.2e-211 738.4 509 71.1
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 3.9e-209 731.5 441 77.8
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.3e-208 728.4 434 79.5
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.6e-207 726.1 441 77.6
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.8e-206 722.6 441 77.1
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 2.4e-206 722.2 436 78.2
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.5e-205 719.5 441 77.1
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 2.6e-205 718.8 447 76.7
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 6.4e-204 714.1 432 78.5
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 3.2e-203 711.8 446 76.7
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 4.2e-203 711.4 438 75.6
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.2e-202 709.9 437 77.1
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 8.7e-201 703.7 440 76.1
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 1.5e-200 703.0 441 75.1
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 4.3e-200 701.4 442 74.2
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 5.6e-200 701.0 441 75.1
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 6.2e-199 697.6 436 77.5
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 1.1e-198 696.8 441 74.8
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 3.1e-198 695.3 441 75.1
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 4.0e-198 694.9 445 73.3
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 6.9e-198 694.1 432 75.2
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 6.9e-198 694.1 437 73.7
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 1.2e-197 693.3 443 74.9
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 1.5e-197 693.0 444 74.3
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 1.5e-197 693.0 448 73.9
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 2.0e-197 692.6 456 72.8
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 2.6e-197 692.2 457 73.3
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.6e-197 692.2 456 72.6
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 5.8e-197 691.0 454 72.2
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 9.9e-197 690.3 441 74.1
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 1.3e-196 689.9 440 73.9
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 1.3e-196 689.9 435 74.3
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 1.7e-196 689.5 445 73.5
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 2.2e-196 689.1 397 78.6
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 2.2e-196 689.1 447 74.3
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 3.8e-196 688.3 441 73.7
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 3.8e-196 688.3 456 72.1
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 6.4e-196 687.6 441 75.3
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 8.4e-196 687.2 457 71.8
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 8.4e-196 687.2 438 74.7
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 1.1e-195 686.8 443 72.5
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 1.1e-195 686.8 447 74.5
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 2.4e-195 685.6 445 75.1
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 7.1e-195 684.1 456 71.9
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 1.2e-194 683.3 398 79.9
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 1.2e-194 683.3 447 74.3
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.6e-194 682.9 455 71.9
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 2.7e-194 682.2 446 74.0
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 7.8e-194 680.6 447 73.2
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 1.7e-193 679.5 413 77.0
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.3e-193 679.1 441 73.7
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 3.0e-193 678.7 443 72.7
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 3.9e-193 678.3 443 71.6
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 3.9e-193 678.3 457 71.8
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 3.9e-193 678.3 444 73.9
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 5.1e-193 677.9 450 73.6
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 6.6e-193 677.6 441 73.5
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 8.7e-193 677.2 444 72.5
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 1.1e-192 676.8 443 72.5
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 1.5e-192 676.4 440 73.0
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 1.5e-192 676.4 447 72.3
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 1.9e-192 676.0 444 72.7
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 2.5e-192 675.6 447 72.7
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.3e-192 675.2 447 72.0
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 3.3e-192 675.2 445 72.8
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 4.3e-192 674.9 444 72.1
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 5.6e-192 674.5 442 73.1
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 7.3e-192 674.1 442 72.4
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 7.3e-192 674.1 445 72.1
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 9.6e-192 673.7 443 73.4
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 1.6e-191 672.9 443 72.9
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 1.6e-191 672.9 444 72.3
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 1.6e-191 672.9 444 71.8
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 1.6e-191 672.9 439 72.7
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 2.1e-191 672.5 445 72.4
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 3.6e-191 671.8 448 72.1
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 4.8e-191 671.4 441 73.5
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 6.2e-191 671.0 447 71.6
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.1e-190 670.2 448 72.3
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 1.4e-190 669.8 443 71.3
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 3.1e-190 668.7 445 72.8
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 3.1e-190 668.7 444 72.5
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 4.0e-190 668.3 429 74.1
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 4.0e-190 668.3 440 72.5
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 9.0e-190 667.2 409 75.3
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 1.5e-189 666.4 439 73.3
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 4.5e-189 664.8 369 82.7
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 7.6e-189 664.1 443 72.5
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 9.9e-189 663.7 369 82.7
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 4.9e-188 661.4 442 72.4
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 8.4e-188 660.6 438 72.1
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 1.9e-187 659.4 444 71.2
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 5.4e-187 657.9 477 68.1
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 7.1e-187 657.5 443 71.3
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 2.7e-186 655.6 402 75.9
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.8e-185 652.9 439 72.4
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 6.7e-185 651.0 434 71.0
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 7.4e-184 647.5 430 72.8
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 9.6e-184 647.1 434 68.7
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 7.6e-181 637.5 385 77.1
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 3.3e-176 622.1 449 68.2
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 4.8e-175 618.2 419 69.0
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 2.9e-172 609.0 322 85.4
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 1.1e-171 607.1 326 84.0
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.8e-169 599.7 352 79.3
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.6e-167 593.2 440 65.2
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 3.3e-160 568.9 411 67.4
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 6.9e-158 561.2 289 86.2
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.1e-155 553.9 339 73.2
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 2.5e-155 552.7 291 84.2
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 1.2e-154 550.4 289 85.5
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 9.7e-152 540.8 346 76.0
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 5.2e-145 518.5 286 80.1
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 8.8e-145 517.7 396 66.2
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 1.7e-143 513.5 270 85.6
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.5e-139 499.6 337 65.0
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 5.2e-129 465.3 304 74.3
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 6.3e-127 458.4 306 75.2
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 5.2e-121 438.7 339 57.8
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 4.9e-119 432.2 285 66.7
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.8e-118 430.3 315 67.9
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 9.5e-107 391.3 348 50.9
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.6e-96 356.7 318 52.2
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 3.3e-91 339.7 250 68.8
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.3e-87 327.8 335 46.9
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 5.6e-67 259.2 179 68.7
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 1.6e-66 257.7 139 81.3
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 6.5e-55 219.2 109 88.1
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 2.7e-53 213.8 119 81.5
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.0e-52 211.8 124 77.4
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 2.0e-48 197.6 127 73.2
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 7.2e-46 189.1 137 62.0
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.4e-33 147.5 85 77.6
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.0e-33 146.0 85 76.5
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 3.6e-29 133.7 80 75.0
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 1.1e-27 128.6 101 62.4
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 1.1e-14 85.5 112 46.4
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.1e-13 81.3 52 73.1


User provided reference genes

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