Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23347 Striga asiatica HOM05D005956 ORTHO05D007197 1.2e-127 460.3 310 100.0
SGA_v2.0_scaffold69G23343 Striga asiatica HOM05D005956 ORTHO05D007197 1.2e-31 141.4 299 60.2
SGA_v2.0_scaffold115G32115 Striga asiatica HOM05D005956 ORTHO05D007197 3.5e-31 139.8 299 59.9
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 1.2e-26 124.8 293 49.8
SalBow8G3086 Salvia bowleyana HOM05D005956 ORTHO05D007197 5.4e-16 89.4 144 86.8
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 1.1e-13 81.6 297 48.8
TAR636G0827 Trochodendron aralioides HOM05D005956 ORTHO05D007197 5.6e-13 79.3 299 47.2
Nn2g12784 Nelumbo nucifera HOM05D005956 ORTHO05D007197 7.3e-13 79.0 303 47.2
Actinidia24382 Actinidia chinensis HOM05D005956 ORTHO05D007197 1.3e-12 78.2 144 83.3
Haze_16217 Corylus avellana HOM05D005956 ORTHO05D007197 1.3e-12 78.2 144 82.6
Hma1.2p1_1111F.1_g258470 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 1.3e-12 78.2 142 78.2
CiPaw.01G207000 Carya illinoinensis HOM05D005956 ORTHO05D007197 2.1e-12 77.4 144 81.9
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 2.8e-12 77.0 144 82.6
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 2.8e-12 77.0 144 83.3
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 3.6e-12 76.6 144 69.4
CSS0010876 Camellia sinensis var. sinensis HOM05D005956 ORTHO05D007197 3.6e-12 76.6 144 81.9
Cfa003426 Carpinus fangiana HOM05D005956 ORTHO05D007197 4.8e-12 76.3 144 82.6
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 1.1e-11 75.1 144 68.8
Migut.D02038 Erythranthe guttata HOM05D005956 ORTHO05D007197 1.4e-11 74.7 144 83.3
MD17G1161200 Malus domestica HOM05D005956 ORTHO05D007197 1.4e-11 74.7 300 46.3
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 1.4e-11 74.7 144 67.4
Cpa.g.sc176.24 Carica papaya HOM05D005956 ORTHO05D007197 1.8e-11 74.3 144 69.4
HanXRQChr15g0497231 Helianthus annuus HOM05D005956 ORTHO05D007197 1.8e-11 74.3 142 81.0
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 2.4e-11 73.9 144 70.1
Gohir.A06G112700 Gossypium hirsutum HOM05D005956 ORTHO05D007197 5.3e-11 72.8 144 77.8
Nitab4.5_0000499g0110 Nicotiana tabacum HOM05D005956 ORTHO05D007197 6.9e-11 72.4 142 80.3
Solyc03g124040.3 Solanum lycopersicum HOM05D005956 ORTHO05D007197 6.9e-11 72.4 142 81.0
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 6.9e-11 72.4 144 82.6
Aa31LG4G2050 Aethionema arabicum HOM05D005956 ORTHO05D007197 1.2e-10 71.6 144 77.1
RcHm_v2.0_Chr2g0149071 Rosa chinensis HOM05D005956 ORTHO05D007197 1.2e-10 71.6 144 80.6
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 1.2e-10 71.6 144 80.6
A07p44100 Brassica napus HOM05D000309 ORTHO05D007197 1.5e-10 71.2 144 77.1
BraA07t31918Z Brassica rapa HOM05D000309 ORTHO05D007197 1.5e-10 71.2 144 79.2
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 1.5e-10 71.2 144 81.2
ECA233G3598 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-10 70.9 144 77.8
Oeu039938.1 Olea europaea HOM05D005956 ORTHO05D007197 2.6e-10 70.5 144 83.3
MBI16_g00686_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 3.4e-10 70.1 144 79.2
TWI12G1352 Tripterygium wilfordii HOM05D005956 ORTHO05D007197 3.4e-10 70.1 144 80.6
BcaB03g16055 Brassica carinata HOM05D005956 ORTHO05D007197 4.5e-10 69.7 144 79.2
Sp5g33970 Schrenkiella parvula HOM05D005956 ORTHO05D007197 4.5e-10 69.7 144 74.3
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 5.8e-10 69.3 144 78.5
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 5.8e-10 69.3 142 81.7
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 5.8e-10 69.3 142 81.7
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 5.8e-10 69.3 144 80.6
PSO063G0021 Papaver somniferum HOM05D005956 ORTHO05D007197 5.8e-10 69.3 144 79.9
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 7.6e-10 68.9 144 77.1
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 9.9e-10 68.6 142 81.0
Lsat_1_v5_gn_4_106240 Lactuca sativa HOM05D005956 ORTHO05D007197 9.9e-10 68.6 142 81.7
Thecc.06G054100 Theobroma cacao HOM05D005956 ORTHO05D007197 9.9e-10 68.6 299 40.1
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 9.9e-10 68.6 144 79.9
PSO170G2336 Papaver somniferum HOM05D005956 ORTHO05D007197 1.7e-09 67.8 144 78.5
unitig_578.g15928 Utricularia gibba HOM05D005956 ORTHO05D007197 1.7e-09 67.8 142 73.9
THA.LOC104812335 Tarenaya hassleriana HOM05D005956 ORTHO05D007197 2.2e-09 67.4 144 75.0
Eucgr.J03191 Eucalyptus grandis HOM05D005956 ORTHO05D007197 3.8e-09 66.6 142 79.6
MELO3C020528.2 Cucumis melo HOM05D005956 ORTHO05D007197 6.4e-09 65.9 144 77.1
C06p52830 Brassica napus HOM05D000309 ORTHO05D007197 1.9e-08 64.3 144 75.7
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 3.2e-08 63.5 144 80.6
Ca_00996_v3 Cicer arietinum L. HOM05D005956 ORTHO05D007197 5.4e-08 62.8 186 26.3
BcaC08g47440 Brassica carinata HOM05D005956 ORTHO05D007197 1.6e-07 61.2 144 77.1
BolC6t40300H Brassica oleracea HOM05D000163 ORTHO05D000219 1.6e-07 61.2 144 77.1
ClCG03G000530 Citrullus lanatus HOM05D005956 ORTHO05D007197 1.6e-07 61.2 138 76.1
Mapoly0216s0005 Marchantia polymorpha HOM05D005956 ORTHO05D007197 2.1e-07 60.8 142 74.6
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 3.5e-07 60.1 142 79.6
Glyma.15G000800 Glycine max HOM05D005956 ORTHO05D007197 7.9e-07 58.9 39 61.5
Aqoxy7G02692 Aquilegia oxysepala HOM05D005956 ORTHO05D007197 1.0e-06 58.5 39 61.5
Thhalv10018313m.g Eutrema salsugineum HOM05D005956 ORTHO05D007197 3.9e-06 56.6 34 70.6
MBI16_g10330_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 3.9e-06 56.6 38 63.2
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 3.9e-06 56.6 39 64.1
QL07p046118 Quercus lobata HOM05D005956 ORTHO05D007197 3.9e-06 56.6 39 61.5
FvH4_4g20560 Fragaria vesca HOM05D005956 ORTHO05D007197 8.7e-06 55.5 42 59.5


User provided reference genes

Program Settings