Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23334 Striga asiatica HOM05D006052 ORTHO05D007319 1.6e-67 259.2 124 100.0
MSTRG.22652 Avicennia marina HOM05D006052 ORTHO05D007319 1.2e-38 163.3 87 88.5
Migut.I00924 Erythranthe guttata HOM05D006052 ORTHO05D007319 4.5e-38 161.4 91 84.6
PGR102G0387 Punica granatum HOM05D006052 ORTHO05D007319 3.2e-36 155.2 95 75.8
Dinv37999 Davidia involucrata HOM05D006052 ORTHO05D007319 4.2e-36 154.8 85 83.5
Cc04_g02780 Coffea canephora HOM05D006052 ORTHO05D007319 5.5e-36 154.5 97 74.2
vmacro16981 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 5.5e-36 154.5 87 82.8
Manes.04G131832 Manihot esculenta HOM05D006052 ORTHO05D007319 2.1e-35 152.5 89 80.9
Gohir.D05G132700 Gossypium hirsutum HOM05D006052 ORTHO05D007319 2.7e-35 152.1 93 73.1
Gorai.009G136400 Gossypium raimondii HOM05D006052 ORTHO05D007319 2.7e-35 152.1 93 73.1
CSS0026597 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 3.6e-35 151.8 85 83.5
CAN.G203.53 Capsicum annuum HOM05D006052 ORTHO05D007319 3.6e-35 151.8 107 68.2
CiPaw.01G233600 Carya illinoinensis HOM05D006052 ORTHO05D007319 3.6e-35 151.8 93 78.5
Hma1.2p1_1689F.1_g297700 Hydrangea macrophylla HOM05D006052 ORTHO05D007319 3.6e-35 151.8 84 83.3
Haze_16332 Corylus avellana HOM05D006052 ORTHO05D007319 4.7e-35 151.4 90 81.1
Eucgr.F03060 Eucalyptus grandis HOM05D006052 ORTHO05D007319 6.1e-35 151.0 84 84.5
Ciclev10026826m.g Citrus clementina HOM05D006052 ORTHO05D007319 7.9e-35 150.6 89 78.7
Gohir.A05G128200 Gossypium hirsutum HOM05D006052 ORTHO05D007319 7.9e-35 150.6 93 73.1
Potri.001G187200 Populus trichocarpa HOM05D006052 ORTHO05D007319 7.9e-35 150.6 84 82.1
Zm00001eb295530 Zea mays HOM05D006052 ORTHO05D007319 1.8e-34 149.4 89 78.7
C06p43560 Brassica napus HOM05D006052 ORTHO05D007319 2.3e-34 149.1 97 68.0
Sc15g0001990 Simmondsia chinensis HOM05D006052 ORTHO05D007319 2.3e-34 149.1 89 75.3
Zm00001eb002070 Zea mays HOM05D006052 ORTHO05D007319 2.3e-34 149.1 89 77.5
Actinidia39148 Actinidia chinensis HOM05D006052 ORTHO05D007319 3.0e-34 148.7 85 81.2
CSS0014721 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 3.0e-34 148.7 85 82.4
Thecc.06G096200 Theobroma cacao HOM05D006052 ORTHO05D007319 3.9e-34 148.3 95 70.5
Dinv32171 Davidia involucrata HOM05D006052 ORTHO05D007319 5.1e-34 147.9 84 82.1
Prupe.3G063000 Prunus persica HOM05D006052 ORTHO05D007319 5.1e-34 147.9 91 78.0
HanXRQChr16g0501261 Helianthus annuus HOM05D006052 ORTHO05D007319 6.7e-34 147.5 85 82.4
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 8.8e-34 147.1 91 74.7
Thhalv10019223m.g Eutrema salsugineum HOM05D006052 ORTHO05D007319 8.8e-34 147.1 113 63.7
CANSAT56G3932 Cannabis sativa HOM05D006052 ORTHO05D007319 1.1e-33 146.7 76 88.2
TWI18G1030 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 1.5e-33 146.4 89 76.4
HanXRQChr02g0032361 Helianthus annuus HOM05D006052 ORTHO05D007319 2.0e-33 146.0 90 75.6
MD17G1187600 Malus domestica HOM05D006052 ORTHO05D007319 2.0e-33 146.0 87 79.3
Nitab4.5_0003039g0060 Nicotiana tabacum HOM05D006052 ORTHO05D007319 2.0e-33 146.0 88 76.1
Peaxi162Scf00038g00824 Petunia axillaris HOM05D006052 ORTHO05D007319 2.0e-33 146.0 88 75.0
THA.LOC104800715 Tarenaya hassleriana HOM05D006052 ORTHO05D007319 2.0e-33 146.0 84 77.4
CsaV3_7G033550 Cucumis sativus L. HOM05D006052 ORTHO05D007319 3.3e-33 145.2 88 72.7
DCAR_026339 Daucus carota HOM05D006052 ORTHO05D007319 3.3e-33 145.2 88 77.3
MBI04_g27065_MAGBIO Magnolia biondii HOM05D006052 ORTHO05D007319 3.3e-33 145.2 90 73.3
Carub.0002s1643 Capsella rubella HOM05D006052 ORTHO05D007319 4.4e-33 144.8 89 70.8
ClCG09G001790 Citrullus lanatus HOM05D006052 ORTHO05D007319 4.4e-33 144.8 88 72.7
Sp5g24870 Schrenkiella parvula HOM05D006052 ORTHO05D007319 4.4e-33 144.8 89 71.9
Solyc03g120820.4 Solanum lycopersicum HOM05D006052 ORTHO05D007319 4.4e-33 144.8 76 85.5
PGSC0003DMG402002538 Solanum tuberosum HOM05D006052 ORTHO05D007319 4.4e-33 144.8 76 85.5
AL2G28930 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 70.8
AT1G66590 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 70.8
AT1G69750 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 70.8
arahy.Tifrunner.gnm1.ann1.69I5GX Arachis hypogaea HOM05D006052 ORTHO05D007319 7.4e-33 144.1 78 79.5
arahy.Tifrunner.gnm1.ann1.NZ5FDW Arachis hypogaea HOM05D006052 ORTHO05D007319 7.4e-33 144.1 78 79.5
arahy.Tifrunner.gnm1.ann1.S0BGA2 Arachis hypogaea HOM05D006052 ORTHO05D007319 7.4e-33 144.1 78 79.5
A07p36160 Brassica napus HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 71.9
BolC6t39428H Brassica oleracea HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 71.9
BraA07t31192Z Brassica rapa HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 71.9
Eucgr.E01716 Eucalyptus grandis HOM05D006052 ORTHO05D007319 7.4e-33 144.1 84 79.8
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 7.4e-33 144.1 109 64.2
Lalb_Chr01g0013101 Lupinus albus HOM05D006052 ORTHO05D007319 7.4e-33 144.1 80 78.8
Lalb_Chr01g0013121 Lupinus albus HOM05D006052 ORTHO05D007319 7.4e-33 144.1 80 78.8
Nitab4.5_0007758g0100 Nicotiana tabacum HOM05D006052 ORTHO05D007319 7.4e-33 144.1 90 73.3
TAR626G0898 Trochodendron aralioides HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 74.2
TAR636G2101 Trochodendron aralioides HOM05D006052 ORTHO05D007319 7.4e-33 144.1 89 74.2
BcaB03g14752 Brassica carinata HOM05D006052 ORTHO05D007319 9.7e-33 143.7 89 71.9
CARHR062820 Cardamine hirsuta HOM05D006052 ORTHO05D007319 9.7e-33 143.7 89 70.8
Glyma.07G017500 Glycine max HOM05D006052 ORTHO05D007319 9.7e-33 143.7 81 77.8
Phvul.010G146800 Phaseolus vulgaris HOM05D006052 ORTHO05D007319 9.7e-33 143.7 81 76.5
Sed0023726 Sechium edule HOM05D006052 ORTHO05D007319 9.7e-33 143.7 81 79.0
Solyc12g044380.3 Solanum lycopersicum HOM05D006052 ORTHO05D007319 9.7e-33 143.7 88 75.0
Sopen12g022650 Solanum pennellii HOM05D006052 ORTHO05D007319 9.7e-33 143.7 88 75.0
PGSC0003DMG400026453 Solanum tuberosum HOM05D006052 ORTHO05D007319 9.7e-33 143.7 88 75.0
EL10Ac9g22109 Beta vulgaris HOM05D006052 ORTHO05D007319 1.3e-32 143.3 85 76.5
ECA232G3158 Erigeron canadensis HOM05D006052 ORTHO05D007319 1.3e-32 143.3 77 85.7
unitig_748.g8097 Utricularia gibba HOM05D003052 ORTHO05D007319 1.3e-32 143.3 92 72.8
BcaB03g15501 Brassica carinata HOM05D006052 ORTHO05D007319 2.8e-32 142.1 89 70.8
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 2.8e-32 142.1 81 75.3
Glyma.08G202700 Glycine max HOM05D006052 ORTHO05D007319 3.7e-32 141.7 81 76.5
PSO566G0324 Papaver somniferum HOM05D006052 ORTHO05D007319 3.7e-32 141.7 98 70.4
Rhsim12G0201800 Rhododendron simsii HOM05D006052 ORTHO05D007319 3.7e-32 141.7 104 69.2
Nn3g18169 Nelumbo nucifera HOM05D006052 ORTHO05D007319 4.8e-32 141.4 89 71.9
FAN14G5158 Fragaria x ananassa HOM05D002582 ORTHO05D002781 6.3e-32 141.0 88 76.1
RcHm_v2.0_Chr2g0139621 Rosa chinensis HOM05D006052 ORTHO05D007319 8.2e-32 140.6 88 76.1
VMungo1309G2952 Vigna mungo HOM05D006052 ORTHO05D007319 8.2e-32 140.6 81 74.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.4e-31 139.8 78 76.9
TPR.G14815 Trifolium pratense HOM05D006052 ORTHO05D007319 1.4e-31 139.8 78 76.9
FAN02G3299 Fragaria x ananassa HOM05D006052 ORTHO05D007319 1.8e-31 139.4 88 75.0
Medtr3g112340 Medicago truncatula HOM05D006052 ORTHO05D007319 3.1e-31 138.7 78 78.2
Medtr8g013760 Medicago truncatula HOM05D006052 ORTHO05D007319 3.1e-31 138.7 78 78.2
HPP92_024167 Vanilla planifolia HOM05D006052 ORTHO05D007319 3.1e-31 138.7 100 67.0
AL1G38650 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 5.3e-31 137.9 84 73.8
Lj3g0026702 Lotus japonicus HOM05D006052 ORTHO05D007319 5.3e-31 137.9 77 76.6
PSO782G5494 Papaver somniferum HOM05D006052 ORTHO05D007319 5.3e-31 137.9 98 69.4
TWI12G0943 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 7.0e-31 137.5 89 70.8
CDE02G2125 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 9.1e-31 137.1 90 70.0
BraA07t30774Z Brassica rapa HOM05D006052 ORTHO05D007319 1.2e-30 136.7 108 59.3
BcaC03g15114 Brassica carinata HOM05D006052 ORTHO05D007319 2.0e-30 136.0 85 69.4
BolC2t08748H Brassica oleracea HOM05D006052 ORTHO05D007319 2.0e-30 136.0 85 69.4
AUR62022170 Chenopodium quinoa HOM05D006052 ORTHO05D007319 2.6e-30 135.6 85 71.8
AUR62031876 Chenopodium quinoa HOM05D006052 ORTHO05D007319 2.6e-30 135.6 85 71.8
GSVIVG01017036001 Vitis vinifera HOM05D006052 ORTHO05D007319 4.5e-30 134.8 89 70.8
Aa31LG7G8230 Aethionema arabicum HOM05D006052 ORTHO05D007319 7.7e-30 134.0 91 65.9
A07p31390 Brassica napus HOM05D006052 ORTHO05D007319 7.7e-30 134.0 94 64.9
CDE08G0656 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 1.0e-29 133.7 88 71.6
SalBow6G3458 Salvia bowleyana HOM05D006052 ORTHO05D007319 3.8e-29 131.7 64 90.6
C02p26750 Brassica napus HOM05D006052 ORTHO05D007319 1.2e-27 126.7 92 62.0
QL05p021035 Quercus lobata HOM05D006052 ORTHO05D007319 2.7e-27 125.6 107 58.9
QL05p020889 Quercus lobata HOM05D006052 ORTHO05D007319 3.6e-27 125.2 82 70.7
Mapoly0075s0024 Marchantia polymorpha HOM05D006052 ORTHO05D007319 1.0e-26 123.6 79 68.4
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 1.8e-26 122.9 72 76.4
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 3.0e-26 122.1 82 67.1
Psat4g197560 Pisum sativum HOM05D006052 ORTHO05D007319 9.7e-25 117.1 63 81.0
SEGI_14426 Sequoiadendron giganteum HOM05D006052 ORTHO05D007319 2.8e-24 115.5 63 81.0
SMO271G0187 Selaginella moellendorffii HOM05D006052 ORTHO05D007319 1.8e-23 112.8 84 58.3
Pp3c14_6840 Physcomitrium patens HOM05D006052 ORTHO05D007319 1.2e-22 110.2 76 61.8
RcHm_v2.0_Chr5g0082611 Rosa chinensis HOM05D006052 ORTHO05D007319 1.7e-21 106.3 64 70.3
AagrBONN_evm.TU.Sc2ySwM_344.4288 Anthoceros agrestis HOM05D006052 ORTHO05D007319 2.9e-21 105.5 91 51.6
MD09G1206900 Malus domestica HOM05D006052 ORTHO05D007319 1.5e-20 103.2 88 60.2
RcHm_v2.0_Chr5g0082321 Rosa chinensis HOM05D006052 ORTHO05D007319 4.2e-20 101.7 64 68.8
Atru.ctg114.13 Acer truncatum HOM05D006052 ORTHO05D007319 5.5e-20 101.3 63 68.3
Nitab4.5_0001315g0290 Nicotiana tabacum HOM05D006052 ORTHO05D007319 9.4e-20 100.5 66 71.2
Nitab4.5_0008606g0020 Nicotiana tabacum HOM05D006052 ORTHO05D007319 9.4e-20 100.5 52 82.7
RcHm_v2.0_Chr4g0404221 Rosa chinensis HOM05D006052 ORTHO05D007319 1.2e-19 100.1 62 71.0
CBR_g27938 Chara braunii HOM05D006052 ORTHO05D007319 2.1e-19 99.4 91 50.5
BraA02t06670Z Brassica rapa HOM05D006052 ORTHO05D007319 8.0e-19 97.4 63 66.7
MELO3C024266.2 Cucumis melo HOM05D006052 ORTHO05D007319 1.0e-18 97.1 64 68.8
A02p16100 Brassica napus HOM05D006052 ORTHO05D007319 6.8e-18 94.4 63 65.1
Lsat_1_v5_gn_1_34740 Lactuca sativa HOM05D006052 ORTHO05D007319 2.0e-17 92.8 73 63.0
Cre10.g454550 Chlamydomonas reinhardtii HOM05D006052 ORTHO05D007319 1.1e-15 87.0 85 48.2
Sp2g00570 Schrenkiella parvula HOM05D006052 ORTHO05D007319 1.1e-15 87.0 59 67.8
Manes.11G036000 Manihot esculenta HOM05D006052 ORTHO05D007319 9.1e-15 84.0 59 64.4
vmacro16174 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 9.1e-15 84.0 62 67.7
MCO15G075 Micromonas commoda HOM05D006052 ORTHO05D007319 1.0e-13 80.5 77 50.6
PRCOL_00001792 Prasinoderma coloniale HOM05D006052 ORTHO05D007319 6.5e-13 77.8 82 45.1
Cfa026674 Carpinus fangiana HOM05D006052 ORTHO05D007319 6.1e-11 71.2 79 46.8
Nn2g12137 Nelumbo nucifera HOM05D006052 ORTHO05D007319 1.0e-10 70.5 46 67.4
TPR.G20406 Trifolium pratense HOM05D006052 ORTHO05D007319 2.3e-10 69.3 30 93.3
CBR_g29697 Chara braunii HOM05D035488 ORTHO05D007319 2.0e-06 56.2 48 47.9


User provided reference genes

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