Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 2.6e-275 951.4 481 100.0
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 1.5e-126 457.2 482 56.8
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 4.2e-124 449.1 490 53.1
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 2.0e-110 403.7 501 50.1
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 3.8e-93 346.3 499 46.5
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 5.2e-90 335.9 494 47.2
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 8.8e-90 335.1 474 47.0
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 8.8e-90 335.1 488 47.1
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 1.5e-89 334.3 494 47.0
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 5.9e-86 322.4 507 45.0
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 1.7e-85 320.9 503 44.3
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 6.5e-85 318.9 489 43.6
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 8.5e-85 318.5 499 44.7
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 3.2e-84 316.6 501 43.5
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 2.1e-83 313.9 509 44.0
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 4.0e-82 309.7 501 42.9
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 2.6e-81 307.0 509 42.6
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 1.7e-80 304.3 507 42.2
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 4.9e-80 302.8 492 42.3
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 6.3e-80 302.4 525 40.4
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 8.3e-80 302.0 451 44.6
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 1.2e-78 298.1 500 42.8
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 1.2e-78 298.1 519 41.8
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 5.9e-78 295.8 490 42.2
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.3e-77 294.7 543 41.8
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.5e-76 291.2 507 41.2
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 2.5e-76 290.4 516 40.7
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 9.5e-76 288.5 503 41.6
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.6e-75 287.7 483 43.3
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 3.6e-75 286.6 506 41.3
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 4.0e-74 283.1 509 40.9
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 6.8e-74 282.3 506 40.3
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 1.5e-73 281.2 483 42.7
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 3.4e-73 280.0 513 40.4
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 4.4e-73 279.6 506 40.1
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 7.5e-73 278.9 510 40.2
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 9.8e-73 278.5 485 42.3
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 6.4e-72 275.8 444 42.8
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 8.3e-72 275.4 549 38.1
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 3.2e-71 273.5 486 41.2
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 4.1e-71 273.1 493 39.1
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 3.5e-70 270.0 525 39.0
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 7.8e-70 268.9 549 37.7
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 3.9e-69 266.5 509 38.1
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 8.6e-69 265.4 499 39.1
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 3.3e-68 263.5 473 41.4
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 4.3e-68 263.1 441 41.3
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 7.3e-68 262.3 520 37.1
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 7.3e-68 262.3 475 41.1
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 7.3e-68 262.3 526 38.0
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.2e-67 261.5 509 40.1
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.6e-67 261.2 534 39.0
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 3.6e-67 260.0 432 41.4
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 8.0e-67 258.8 450 42.2
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.4e-66 258.1 551 36.7
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 1.4e-66 258.1 447 40.7
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.4e-66 258.1 496 39.1
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 4.0e-66 256.5 455 42.9
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.2e-65 255.0 486 38.5
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 1.5e-65 254.6 541 37.3
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 2.0e-65 254.2 438 39.5
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 2.9e-64 250.4 435 39.1
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 8.3e-64 248.8 513 37.8
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 9.2e-63 245.4 465 39.6
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 4.6e-62 243.0 477 37.5
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 7.8e-62 242.3 451 39.5
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.0e-61 241.9 459 39.2
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 4.3e-60 236.5 434 38.5
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 4.3e-60 236.5 406 41.9
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 5.6e-60 236.1 440 40.5
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 5.6e-60 236.1 440 40.5
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 9.5e-60 235.3 428 40.7
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.8e-58 231.1 459 38.1
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 5.2e-58 229.6 500 36.0
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 8.9e-58 228.8 430 39.1
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 1.2e-57 228.4 492 37.2
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 2.0e-57 227.6 454 37.4
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 4.4e-57 226.5 490 36.5
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 4.4e-57 226.5 417 39.8
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 7.5e-57 225.7 468 35.0
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.3e-56 224.9 464 35.3
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 1.7e-56 224.6 400 39.5
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 1.7e-56 224.6 454 37.0
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 2.9e-56 223.8 510 37.6
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 4.9e-56 223.0 463 36.3
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 4.9e-56 223.0 444 37.8
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 2.4e-55 220.7 502 36.9
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 5.4e-55 219.5 439 37.8
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 1.2e-54 218.4 496 36.5
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.3e-53 214.2 485 35.7
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 2.3e-53 214.2 452 37.8
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 5.1e-53 213.0 485 35.9
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.3e-52 210.3 430 37.0
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 5.6e-52 209.5 432 37.0
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.1e-51 207.6 482 35.3
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 2.0e-49 201.1 431 36.4
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 2.0e-49 201.1 431 36.4
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 2.0e-49 201.1 431 36.4
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 3.4e-49 200.3 449 36.5
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 8.4e-48 195.7 441 34.5
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 8.9e-42 175.6 476 32.4
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 7.6e-41 172.6 461 33.8
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.0e-37 162.2 354 36.7
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 7.3e-36 156.0 475 30.5
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 8.1e-35 152.5 219 46.6
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 5.3e-34 149.8 202 44.6
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 5.8e-33 146.4 399 30.3
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 1.9e-28 131.3 220 40.9
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 2.1e-27 127.9 157 48.4
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 7.6e-25 119.4 326 33.7
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 5.1e-21 106.7 235 36.6
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.5e-20 105.1 219 32.9
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 8.1e-19 99.4 238 34.5
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 5.5e-15 86.7 437 27.5
ECA234G0697 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.4e-10 72.0 224 31.7
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 9.0e-10 69.3 85 48.2
SGA_v2.0_scaffold395G50725 Striga asiatica HOM05D004070 ORTHO05D004904 7.2e-07 59.7 75 52.0


User provided reference genes

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