Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 8.2e-111 403.7 196 100.0
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 4.5e-101 371.3 199 92.0
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 8.0e-82 307.4 205 77.1
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 6.4e-79 297.7 204 75.0
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 1.3e-76 290.0 203 72.4
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 5.0e-76 288.1 208 72.6
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 1.1e-75 287.0 208 74.0
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 1.5e-75 286.6 203 72.9
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 2.8e-74 282.3 200 74.0
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 6.2e-74 281.2 206 71.8
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 6.2e-74 281.2 201 72.1
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 1.1e-73 280.4 206 72.3
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 1.4e-73 280.0 206 71.4
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 1.8e-73 279.6 208 72.1
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 1.8e-73 279.6 201 72.1
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 1.8e-73 279.6 205 72.7
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 4.0e-73 278.5 205 72.7
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 5.2e-73 278.1 205 72.2
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 5.2e-73 278.1 210 69.5
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 8.9e-73 277.3 201 71.1
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 1.5e-72 276.6 200 72.0
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 3.4e-72 275.4 202 70.8
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 5.8e-72 274.6 197 72.6
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 5.8e-72 274.6 210 70.0
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 7.5e-72 274.2 186 75.3
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 1.7e-71 273.1 202 71.8
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.7e-71 273.1 185 74.6
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 2.2e-71 272.7 207 71.5
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 2.2e-71 272.7 201 71.6
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 2.9e-71 272.3 204 70.6
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 2.9e-71 272.3 197 71.1
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 3.7e-71 271.9 201 70.6
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 4.9e-71 271.6 198 70.7
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 6.4e-71 271.2 198 68.7
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 1.1e-70 270.4 183 76.0
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.9e-70 269.6 208 69.2
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.9e-70 269.6 205 70.7
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 2.4e-70 269.2 185 74.1
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 3.2e-70 268.9 203 70.0
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 3.2e-70 268.9 200 72.0
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 3.2e-70 268.9 207 70.0
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 4.1e-70 268.5 200 72.0
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 5.4e-70 268.1 200 70.0
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 5.4e-70 268.1 204 70.6
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 7.0e-70 267.7 199 70.4
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 9.2e-70 267.3 202 69.3
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 2.1e-69 266.2 179 75.4
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 6.0e-69 264.6 205 68.8
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 1.0e-68 263.8 199 69.8
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 1.0e-68 263.8 196 70.9
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 1.3e-68 263.5 204 71.1
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 3.9e-68 261.9 198 68.7
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 3.9e-68 261.9 199 69.3
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 6.6e-68 261.2 189 71.4
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 6.6e-68 261.2 189 71.4
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 8.6e-68 260.8 196 68.9
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 8.6e-68 260.8 189 71.4
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 1.1e-67 260.4 200 67.5
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 1.9e-67 259.6 201 69.7
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 2.5e-67 259.2 198 68.2
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 2.5e-67 259.2 195 69.7
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 2.5e-67 259.2 209 68.9
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 3.3e-67 258.8 197 69.5
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 4.3e-67 258.5 196 69.4
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 5.6e-67 258.1 196 70.4
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 7.3e-67 257.7 197 70.1
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 7.3e-67 257.7 205 66.3
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 3.6e-66 255.4 192 69.8
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 4.7e-66 255.0 198 67.7
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 4.7e-66 255.0 198 67.7
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 8.1e-66 254.2 216 63.9
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 1.1e-65 253.8 184 71.2
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 1.4e-65 253.4 198 67.7
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 1.4e-65 253.4 182 72.0
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 2.3e-65 252.7 201 66.7
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 2.3e-65 252.7 185 70.8
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 2.3e-65 252.7 208 66.8
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 6.8e-65 251.1 183 71.6
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 8.9e-65 250.8 205 67.8
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.0e-64 249.6 182 71.4
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 2.6e-64 249.2 210 63.3
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 9.9e-64 247.3 190 67.4
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 9.9e-64 247.3 193 67.4
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.3e-63 246.9 186 69.4
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 2.9e-63 245.7 181 71.3
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 4.9e-63 245.0 204 63.7
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 4.9e-63 245.0 210 63.3
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 1.4e-62 243.4 190 68.9
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 1.4e-62 243.4 207 64.7
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 7.1e-62 241.1 198 64.6
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 3.5e-61 238.8 192 66.7
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 1.0e-60 237.3 189 67.2
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 2.3e-60 236.1 148 78.4
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.3e-60 236.1 148 78.4
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 1.1e-59 233.8 200 64.5
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 1.9e-59 233.0 200 64.0
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 2.5e-59 232.6 178 68.0
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.5e-59 232.6 148 77.7
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 7.3e-59 231.1 212 60.4
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 9.5e-59 230.7 130 84.6
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.5e-56 223.4 126 83.3
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 2.6e-56 222.6 147 72.8
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 2.6e-56 222.6 211 59.2
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 2.6e-56 222.6 111 89.2
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 1.3e-55 220.3 160 74.4
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 1.7e-55 219.9 201 61.7
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 2.9e-55 219.2 206 65.0
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 1.1e-54 217.2 195 61.0
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 3.2e-54 215.7 173 65.3
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 1.2e-53 213.8 205 58.0
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 1.2e-53 213.8 129 76.0
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 1.1e-51 207.2 151 72.8
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 5.6e-51 204.9 114 81.6
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 3.6e-50 202.2 190 58.4
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 9.0e-49 197.6 204 58.3
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 6.4e-47 191.4 95 90.5
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 1.1e-46 190.7 108 83.3
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 1.4e-46 190.3 158 65.8
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 2.1e-45 186.4 91 93.4
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 3.5e-37 159.1 122 68.9
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 9.6e-35 151.0 82 82.9
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 4.2e-30 135.6 204 45.6
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 4.6e-29 132.1 105 56.2
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 5.6e-27 125.2 120 58.3
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 4.0e-25 119.0 59 89.8
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 7.6e-24 114.8 93 54.8
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 2.3e-20 103.2 205 42.4
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 2.3e-20 103.2 121 45.5
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 8.2e-18 94.7 83 56.6
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 9.4e-14 81.3 53 73.6
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 2.7e-13 79.7 114 38.6
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 5.1e-12 75.5 38 86.8
Solyc03g094070.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.0e-11 73.6 85 47.1
Cfa025999 Carpinus fangiana HOM05D005916 ORTHO05D007168 5.0e-07 58.9 83 43.4
PGSC0003DMG401008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 6.5e-07 58.5 28 85.7
FAN11G3144 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.1e-06 57.8 107 41.1
Dinv07271 Davidia involucrata HOM05D005916 ORTHO05D007168 4.2e-06 55.8 34 70.6


User provided reference genes

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