Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 3.1e-281 971.1 470 100.0
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 2.0e-232 808.9 502 81.1
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 4.9e-226 787.7 477 80.9
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 7.3e-222 773.9 465 80.4
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 1.0e-220 770.0 493 76.9
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 1.0e-220 770.0 493 76.9
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 1.4e-220 769.6 477 79.2
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 5.2e-220 767.7 490 77.6
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 1.2e-219 766.5 466 79.4
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 3.4e-219 765.0 488 76.2
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 4.9e-218 761.1 491 75.8
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 1.1e-217 760.0 499 73.7
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 1.8e-217 759.2 484 76.7
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 7.0e-217 757.3 486 76.5
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 7.0e-217 757.3 475 78.5
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 7.0e-217 757.3 475 78.5
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 1.2e-216 756.5 492 74.6
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 4.6e-216 754.6 488 75.6
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 1.0e-215 753.4 471 77.3
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 3.0e-215 751.9 495 76.2
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 3.0e-215 751.9 477 76.3
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 6.6e-215 750.7 481 76.5
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 1.5e-214 749.6 502 72.5
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 5.6e-214 747.7 488 75.6
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 5.6e-214 747.7 478 75.5
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 5.6e-214 747.7 475 75.8
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 7.3e-214 747.3 475 76.0
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 2.8e-213 745.3 470 77.0
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 2.8e-213 745.3 483 75.4
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 3.6e-213 745.0 496 74.8
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 6.2e-213 744.2 475 76.6
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 2.3e-212 742.3 479 76.0
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 2.3e-212 742.3 489 73.6
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 2.3e-212 742.3 475 74.5
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 3.1e-212 741.9 463 76.7
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 4.0e-212 741.5 475 74.3
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 1.2e-211 740.0 472 75.6
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 1.2e-211 740.0 475 76.2
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.5e-211 739.6 475 75.6
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 2.6e-211 738.8 467 75.4
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 2.6e-211 738.8 470 75.3
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 4.4e-211 738.0 472 75.0
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 1.7e-210 736.1 482 75.5
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 3.7e-210 734.9 472 75.2
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 4.9e-210 734.6 502 72.9
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 8.3e-210 733.8 480 73.1
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 1.1e-209 733.4 472 75.0
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 4.1e-209 731.5 502 72.7
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 1.2e-208 729.9 484 74.0
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 1.2e-208 729.9 484 74.0
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 2.1e-208 729.2 477 75.7
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 2.7e-208 728.8 461 74.2
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 3.5e-208 728.4 484 73.8
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 6.0e-208 727.6 484 73.8
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 1.0e-207 726.9 476 73.9
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 6.6e-207 724.2 458 75.1
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 3.3e-206 721.8 458 75.5
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 4.3e-206 721.5 472 75.2
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 5.6e-206 721.1 468 75.6
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 4.7e-205 718.0 485 73.2
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 4.7e-205 718.0 495 70.9
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 4.7e-205 718.0 471 72.8
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 4.7e-205 718.0 473 73.4
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 8.1e-205 717.2 453 77.9
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 6.8e-204 714.1 571 62.7
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 1.5e-203 713.0 500 71.8
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 7.5e-203 710.7 470 71.9
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 1.7e-202 709.5 484 71.9
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 4.9e-202 708.0 513 68.0
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 4.9e-202 708.0 498 71.1
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 1.4e-201 706.4 463 73.7
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 1.9e-201 706.1 473 74.0
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 9.2e-201 703.7 479 72.0
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 1.6e-200 703.0 470 73.2
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 2.3e-199 699.1 478 72.6
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 3.0e-199 698.7 481 72.3
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 5.1e-199 698.0 465 73.5
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 1.5e-198 696.4 477 71.1
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 3.3e-198 695.3 465 73.5
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 2.1e-197 692.6 475 70.3
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 3.6e-197 691.8 469 71.9
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 1.4e-196 689.9 470 71.7
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 6.4e-194 681.0 491 69.2
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 8.4e-194 680.6 465 71.6
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 5.4e-193 677.9 474 70.7
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 9.2e-193 677.2 498 69.3
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 1.4e-185 653.3 507 64.7
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 5.1e-183 644.8 500 66.4
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 1.1e-182 643.7 491 63.1
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 1.1e-177 627.1 466 65.2
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 4.0e-172 608.6 419 70.9
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 4.0e-164 582.0 354 78.2
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 1.1e-156 557.4 354 74.6
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 7.9e-152 541.2 527 55.6
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 5.3e-148 528.5 541 55.6
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 3.9e-143 512.3 346 70.8
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 1.2e-139 500.7 348 70.7
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 1.3e-138 497.3 332 72.3
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 3.6e-128 462.6 421 54.2
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 6.3e-125 451.8 347 62.8
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 2.5e-121 439.9 291 72.5
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 2.3e-119 433.3 235 85.1
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 2.6e-118 429.9 302 67.9
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.9e-105 387.1 267 71.5
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 1.5e-102 377.5 265 69.1
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 7.0e-100 368.6 456 45.2
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.5e-97 360.9 448 45.8
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 2.3e-90 337.0 247 69.6
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 7.1e-84 315.5 215 71.2
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.1e-79 301.6 476 37.6
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 8.4e-69 265.4 163 77.3
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.3e-66 257.3 210 63.8
Lj9A687T77 Lonicera japonica HOM05D000306 ORTHO05D007657 1.6e-64 251.1 143 82.5
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.0e-54 217.6 170 67.1
HanXRQChr09g0255811 Helianthus annuus HOM05D000306 ORTHO05D007657 2.5e-52 210.7 125 77.6
SEGI_25583 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 1.0e-50 205.3 134 70.1
arahy.Tifrunner.gnm1.ann1.ID2I7H Arachis hypogaea HOM05D000306 ORTHO05D007657 2.1e-48 197.6 128 75.0
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.5e-46 191.4 132 71.2
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.6e-43 181.4 116 75.0
Aqoxy3G01525 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.2e-38 165.2 88 84.1
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 3.7e-32 143.7 445 28.1
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 1.5e-30 138.3 441 26.8
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.9e-28 131.3 106 60.4
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 1.7e-24 118.2 74 78.4
DCAR_020114 Daucus carota HOM05D000306 ORTHO05D007657 2.8e-24 117.5 85 67.1
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 4.8e-24 116.7 67 76.1
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 4.8e-24 116.7 462 27.1
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 2.0e-22 111.3 74 74.3
CAN.G790.37 Capsicum annuum HOM05D000306 ORTHO05D007657 3.2e-20 104.0 55 85.5
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 2.8e-16 90.9 63 74.6
TPR.G18960 Trifolium pratense HOM05D000306 ORTHO05D007657 3.2e-12 77.4 52 73.1
arahy.Tifrunner.gnm1.ann1.QZT5UT Arachis hypogaea HOM05D000200 ORTHO05D010534 2.1e-11 74.7 50 72.0


User provided reference genes

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