Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23249 Striga asiatica HOM05D007262 ORTHO05D008524 4.5e-172 607.8 309 100.0
SalBow6G4300 Salvia bowleyana HOM05D007262 ORTHO05D008524 1.3e-30 137.9 345 36.2
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 6.0e-23 112.5 279 34.4
Peaxi162Scf00231g00727 Petunia axillaris HOM05D007262 ORTHO05D008524 6.0e-23 112.5 276 31.9
Sopen07g007460 Solanum pennellii HOM05D007262 ORTHO05D008524 4.3e-21 106.3 287 30.0
Migut.J01486 Erythranthe guttata HOM05D007262 ORTHO05D008524 6.2e-20 102.4 189 41.3
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 1.9e-16 90.9 177 39.5
Nitab4.5_0012916g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 7.1e-16 89.0 340 28.2
Oeu042172.1 Olea europaea HOM05D007262 ORTHO05D008524 3.5e-15 86.7 118 45.8
Nitab4.5_0007075g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 1.3e-14 84.7 88 50.0
DCAR_009916 Daucus carota HOM05D007262 ORTHO05D008524 1.7e-14 84.3 296 29.7
Sc08g0005310 Simmondsia chinensis HOM05D007262 ORTHO05D008524 1.1e-13 81.6 96 42.7
TWI34G1693 Tripterygium wilfordii HOM05D007262 ORTHO05D008524 3.3e-13 80.1 104 40.4
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 1.2e-12 78.2 109 44.0
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 3.6e-12 76.6 79 50.6
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 8.1e-12 75.5 82 48.8
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 1.4e-11 74.7 134 38.8
Gohir.A13G212100 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.8e-11 74.3 160 30.6
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 4.0e-11 73.2 160 31.2
RcHm_v2.0_Chr4g0402361 Rosa chinensis HOM05D007262 ORTHO05D008524 4.0e-11 73.2 98 39.8
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 5.2e-11 72.8 99 43.4
Sed0015293 Sechium edule HOM05D007262 ORTHO05D008524 5.2e-11 72.8 97 40.2
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 8.9e-11 72.0 85 43.5
Dinv41243 Davidia involucrata HOM05D007262 ORTHO05D008524 1.2e-10 71.6 62 56.5
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 1.2e-10 71.6 98 39.8
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 1.5e-10 71.2 100 41.0
COL.COLO4_37717 Corchorus olitorius HOM05D007262 ORTHO05D008524 4.4e-10 69.7 74 47.3
HanXRQChr11g0322411 Helianthus annuus HOM05D007262 ORTHO05D008524 4.4e-10 69.7 95 45.3
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 4.4e-10 69.7 100 37.0
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 7.6e-10 68.9 74 47.3
Ah.14g083780 Amaranthus hybridus HOM05D007262 ORTHO05D008524 9.9e-10 68.6 87 41.4
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 1.3e-09 68.2 77 45.5
Rhsim01G0003900 Rhododendron simsii HOM05D000138 ORTHO05D000078 1.3e-09 68.2 105 39.0
BcaB05g22344 Brassica carinata HOM05D007262 ORTHO05D008524 1.7e-09 67.8 97 40.2
CiPaw.08G035900 Carya illinoinensis HOM05D007262 ORTHO05D008524 2.9e-09 67.0 82 43.9
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 2.9e-09 67.0 160 29.4
MD13G1252900 Malus domestica HOM05D007262 ORTHO05D008524 2.9e-09 67.0 135 34.8
EL10Ac8g18288 Beta vulgaris HOM05D023972 ORTHO05D008524 4.9e-09 66.2 87 40.2
BcaC03g14155 Brassica carinata HOM05D007262 ORTHO05D008524 4.9e-09 66.2 118 37.3
A02p08490 Brassica napus HOM05D007262 ORTHO05D008524 4.9e-09 66.2 104 39.4
BraA02t05922Z Brassica rapa HOM05D007262 ORTHO05D008524 4.9e-09 66.2 104 39.4
VMungo1215G2644 Vigna mungo HOM05D007262 ORTHO05D008524 6.4e-09 65.9 90 42.2
C02p14260 Brassica napus HOM05D007262 ORTHO05D008524 8.4e-09 65.5 104 39.4
BolC2t07550H Brassica oleracea HOM05D007262 ORTHO05D008524 8.4e-09 65.5 104 39.4
PGR044G1778 Punica granatum HOM05D007262 ORTHO05D008524 8.4e-09 65.5 116 36.2
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 1.4e-08 64.7 88 40.9
MD16G1257400 Malus domestica HOM05D007262 ORTHO05D008524 1.4e-08 64.7 101 40.6
Migut.J01487 Erythranthe guttata HOM05D007262 ORTHO05D008524 3.2e-08 63.5 134 37.3
Nitab4.5_0007075g0020 Nicotiana tabacum HOM05D007262 ORTHO05D008524 3.2e-08 63.5 84 45.2
Aa31LG3G13290 Aethionema arabicum HOM05D007262 ORTHO05D008524 4.2e-08 63.2 84 41.7
Manes.14G154200 Manihot esculenta HOM05D007262 ORTHO05D008524 4.2e-08 63.2 118 37.3
Thecc.09G176700 Theobroma cacao HOM05D018436 ORTHO05D025173 5.4e-08 62.8 75 41.3
Nn8g40468 Nelumbo nucifera HOM05D007262 ORTHO05D008524 7.1e-08 62.4 160 33.1
arahy.Tifrunner.gnm1.ann1.7KD434 Arachis hypogaea HOM05D007262 ORTHO05D008524 1.2e-07 61.6 79 41.8
Lsat_1_v5_gn_8_67760 Lactuca sativa HOM05D007262 ORTHO05D008524 2.1e-07 60.8 98 38.8
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 3.5e-07 60.1 93 46.2
Ca_21230_v3 Cicer arietinum L. HOM05D007262 ORTHO05D008524 4.6e-07 59.7 88 40.9
MELO3C004021.2 Cucumis melo HOM05D007262 ORTHO05D008524 4.6e-07 59.7 102 37.3
PGSC0003DMG400013783 Solanum tuberosum HOM05D007262 ORTHO05D008524 4.6e-07 59.7 107 36.4
AUR62021304 Chenopodium quinoa HOM05D007262 ORTHO05D008524 7.8e-07 58.9 101 34.7
COL.COLO4_37718 Corchorus olitorius HOM05D018436 ORTHO05D008524 7.8e-07 58.9 76 40.8
Phvul.003G145250 Phaseolus vulgaris HOM05D007262 ORTHO05D008524 7.8e-07 58.9 90 38.9
Sed0023592 Sechium edule HOM05D007262 ORTHO05D008524 1.3e-06 58.2 60 46.7
Solyc07g018310.4 Solanum lycopersicum HOM05D007262 ORTHO05D008524 1.3e-06 58.2 125 34.4
ClCG11G012130 Citrullus lanatus HOM05D007262 ORTHO05D008524 1.7e-06 57.8 116 32.8
ECA236G2076 Erigeron canadensis HOM05D007262 ORTHO05D008524 1.7e-06 57.8 90 34.4
Glyma.17G062800 Glycine max HOM05D007262 ORTHO05D008524 1.7e-06 57.8 92 39.1
AT4G25850 Arabidopsis thaliana HOM05D003168 ORTHO05D003590 2.3e-06 57.4 110 34.5
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 2.3e-06 57.4 95 38.9
CsaV3_2G008430 Cucumis sativus L. HOM05D007262 ORTHO05D008524 3.0e-06 57.0 106 34.9
THA.LOC104811785 Tarenaya hassleriana HOM05D007262 ORTHO05D008524 3.0e-06 57.0 94 38.3
BcaC04g19970 Brassica carinata HOM05D007262 ORTHO05D008524 3.9e-06 56.6 113 36.3
C09p49280 Brassica napus HOM05D007262 ORTHO05D008524 3.9e-06 56.6 113 36.3
BolC9t57779H Brassica oleracea HOM05D007262 ORTHO05D008524 3.9e-06 56.6 113 36.3
ClCG06G013370 Citrullus lanatus HOM05D007262 ORTHO05D008524 3.9e-06 56.6 67 41.8
CsaV3_1G031620 Cucumis sativus L. HOM05D007262 ORTHO05D008524 3.9e-06 56.6 59 47.5
Aa31LG3G240 Aethionema arabicum HOM05D007262 ORTHO05D008524 6.6e-06 55.8 52 51.9
Medtr4g127960 Medicago truncatula HOM05D007262 ORTHO05D008524 6.6e-06 55.8 89 38.2


User provided reference genes

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