Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 6.0e-89 330.9 173 100.0
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 9.0e-53 210.7 175 68.6
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 4.3e-47 191.8 179 60.3
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 5.7e-47 191.4 170 64.7
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 3.8e-43 178.7 178 58.4
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 3.9e-40 168.7 178 57.3
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 2.9e-35 152.5 166 54.8
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 1.2e-33 147.1 180 52.8
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 4.7e-33 145.2 171 51.5
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 1.4e-32 143.7 178 53.4
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 6.7e-32 141.4 181 50.8
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 1.5e-31 140.2 200 45.5
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 4.4e-31 138.7 178 51.1
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 7.4e-31 137.9 162 54.3
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 9.7e-31 137.5 177 51.4
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 3.7e-30 135.6 174 50.6
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 4.8e-30 135.2 179 49.2
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 4.8e-30 135.2 164 52.4
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 6.3e-30 134.8 158 53.2
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 1.1e-29 134.0 165 53.9
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 1.8e-29 133.3 155 52.9
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 2.4e-29 132.9 160 51.9
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 2.4e-29 132.9 173 49.7
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.4e-29 132.9 162 48.1
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 4.1e-29 132.1 158 52.5
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 5.3e-29 131.7 163 46.6
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 7.0e-29 131.3 176 50.0
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 1.2e-28 130.6 163 50.3
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 4.5e-28 128.6 181 50.8
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 1.0e-27 127.5 175 45.1
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.7e-27 126.7 168 50.0
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.7e-27 126.7 163 50.3
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 2.2e-27 126.3 152 55.3
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 5.0e-27 125.2 176 47.2
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 5.0e-27 125.2 178 48.3
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 8.5e-27 124.4 174 44.3
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 8.5e-27 124.4 169 47.9
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.5e-26 123.6 126 54.8
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.5e-26 123.6 126 54.8
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.9e-26 123.2 165 47.9
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 2.5e-26 122.9 173 48.6
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 4.2e-26 122.1 179 45.3
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 4.2e-26 122.1 160 47.5
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 5.5e-26 121.7 162 46.9
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 7.2e-26 121.3 178 43.8
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 9.4e-26 120.9 164 46.3
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 1.2e-25 120.6 172 44.2
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.6e-25 120.2 167 46.1
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 2.7e-25 119.4 160 47.5
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 6.1e-25 118.2 183 43.2
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 6.1e-25 118.2 166 44.6
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 8.0e-25 117.9 166 45.8
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 1.0e-24 117.5 177 42.4
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 3.0e-24 115.9 167 45.5
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 4.0e-24 115.5 169 45.0
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 5.2e-24 115.2 167 44.9
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 6.7e-24 114.8 158 46.8
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 6.7e-24 114.8 158 44.3
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 8.8e-24 114.4 174 41.4
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 1.5e-23 113.6 160 46.2
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 2.0e-23 113.2 158 45.6
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 2.6e-23 112.8 167 44.3
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 3.3e-23 112.5 184 41.3
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.3e-23 112.5 172 46.5
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 7.5e-23 111.3 161 43.5
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 7.5e-23 111.3 174 39.7
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 1.3e-22 110.5 177 39.5
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.3e-22 110.5 172 45.9
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.2e-22 109.8 178 42.7
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 2.8e-22 109.4 168 42.9
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 2.8e-22 109.4 175 40.6
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 8.2e-22 107.8 168 42.3
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 1.1e-21 107.5 168 41.7
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 1.1e-21 107.5 171 40.9
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 1.1e-21 107.5 168 41.7
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 1.4e-21 107.1 188 40.4
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 1.4e-21 107.1 188 41.0
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.4e-21 107.1 178 42.1
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 3.1e-21 105.9 178 42.7
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 3.1e-21 105.9 174 40.8
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 2.6e-20 102.8 125 50.4
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 4.5e-20 102.1 108 53.7
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 5.9e-20 101.7 106 54.7
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 5.9e-20 101.7 146 41.8
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 1.3e-19 100.5 161 41.0
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 2.2e-19 99.8 83 63.9
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 1.1e-18 97.4 91 57.1
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 3.2e-18 95.9 177 39.5
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 2.1e-17 93.2 83 60.2
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 2.1e-17 93.2 88 54.5
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 2.1e-17 93.2 126 46.8
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 6.1e-17 91.7 149 38.9
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.8e-16 90.1 81 61.7
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 7.5e-15 84.7 92 52.2
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 2.8e-14 82.8 145 39.3
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 2.8e-14 82.8 89 51.7
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.2e-12 77.4 144 37.5
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 3.8e-11 72.4 103 42.7
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 4.7e-09 65.5 65 55.4
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.2e-07 60.8 97 40.2
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.5e-07 60.5 102 38.2


User provided reference genes

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