Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23150 Striga asiatica HOM05D002974 ORTHO05D002992 8.2e-73 276.9 138 100.0
SGA_v2.0_scaffold105G30310 Striga asiatica HOM05D002974 ORTHO05D002992 6.1e-28 127.9 134 59.7
SGA_v2.0_scaffold105G30292 Striga asiatica HOM05D002974 ORTHO05D002992 1.8e-27 126.3 134 59.0
SalBow6G6653 Salvia bowleyana HOM05D002974 ORTHO05D002992 2.2e-09 66.2 76 53.9
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 5.4e-08 61.6 140 38.6
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 7.1e-08 61.2 53 56.6
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 7.1e-08 61.2 53 56.6
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.1e-07 59.7 53 60.4
unitig_748.g7224 Utricularia gibba HOM05D002974 ORTHO05D002992 2.1e-07 59.7 92 43.5
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.7e-07 59.3 49 63.3
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.5e-07 58.9 67 53.7
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.5e-07 58.9 55 60.0
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 6.0e-07 58.2 59 57.6
Nitab4.5_0000812g0090 Nicotiana tabacum HOM05D015198 ORTHO05D002992 7.8e-07 57.8 135 36.3
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 7.8e-07 57.8 48 62.5
FAN02G0528 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.0e-06 57.4 67 52.2
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 1.0e-06 57.4 55 60.0
Peaxi162Scf00003g00491 Petunia axillaris HOM05D015198 ORTHO05D002992 1.0e-06 57.4 47 63.8
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 1.3e-06 57.0 57 57.9
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 1.3e-06 57.0 131 33.6
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.3e-06 57.0 39 71.8
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 1.3e-06 57.0 62 53.2
ATR1096G079 Amborella trichopoda HOM05D002974 ORTHO05D002992 1.7e-06 56.6 52 61.5
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.7e-06 56.6 51 58.8
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 1.7e-06 56.6 79 46.8
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 1.7e-06 56.6 55 60.0
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 2.3e-06 56.2 51 56.9
Nitab4.5_0004588g0030 Nicotiana tabacum HOM05D015198 ORTHO05D002992 2.3e-06 56.2 50 58.0
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 2.3e-06 56.2 76 50.0
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 3.0e-06 55.8 49 61.2
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.0e-06 55.8 67 52.2
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 3.9e-06 55.5 69 49.3
Migut.J01657 Erythranthe guttata HOM05D002974 ORTHO05D002992 3.9e-06 55.5 130 38.5
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 3.9e-06 55.5 63 52.4
DCAR_020574 Daucus carota HOM05D015198 ORTHO05D002992 6.6e-06 54.7 68 42.6
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 6.6e-06 54.7 63 52.4
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 8.6e-06 54.3 111 38.7
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 8.6e-06 54.3 77 42.9
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 8.6e-06 54.3 134 35.1
RcHm_v2.0_Chr2g0125651 Rosa chinensis HOM05D002974 ORTHO05D002992 8.6e-06 54.3 51 56.9
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 8.6e-06 54.3 128 39.1


User provided reference genes

Program Settings