Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.2e-88 328.9 167 100.0
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 2.3e-45 186.0 169 61.5
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.9e-31 139.8 149 51.7
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 3.2e-31 139.0 174 48.3
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 3.2e-31 139.0 174 48.3
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.1e-22 109.8 95 58.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.6e-22 109.0 75 73.3
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 6.1e-22 108.2 88 64.8
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 8.0e-22 107.8 78 70.5
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.4e-21 107.1 93 59.1
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.8e-21 106.7 73 75.3
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.3e-21 106.3 112 55.4
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.3e-21 106.3 112 55.4
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.5e-20 103.6 113 54.0
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 2.0e-20 103.2 115 50.4
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.6e-20 102.8 76 68.4
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.3e-20 102.4 136 45.6
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 4.4e-20 102.1 91 61.5
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 4.4e-20 102.1 69 72.5
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.4e-20 102.1 73 71.2
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 5.7e-20 101.7 73 72.6
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 7.4e-20 101.3 72 68.1
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.3e-19 100.5 106 55.7
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.3e-19 100.5 74 66.2
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 2.2e-19 99.8 104 53.8
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 2.2e-19 99.8 75 66.7
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.8e-19 99.4 117 50.4
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 2.8e-19 99.4 120 52.5
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.8e-19 99.4 88 60.2
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 3.7e-19 99.0 79 64.6
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.7e-19 99.0 79 64.6
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.7e-19 99.0 79 64.6
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.7e-19 99.0 77 63.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 6.3e-19 98.2 64 71.9
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 6.3e-19 98.2 69 73.9
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 8.2e-19 97.8 76 63.2
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 8.2e-19 97.8 79 64.6
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 8.2e-19 97.8 88 59.1
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.1e-18 97.4 106 51.9
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.8e-18 96.7 68 67.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.4e-18 96.3 73 64.4
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 2.4e-18 96.3 118 49.2
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 3.1e-18 95.9 67 67.2
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.1e-18 95.9 64 73.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 3.1e-18 95.9 64 68.8
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 3.1e-18 95.9 69 68.1
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 4.1e-18 95.5 86 55.8
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 4.1e-18 95.5 82 61.0
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 5.3e-18 95.1 82 59.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 5.3e-18 95.1 67 68.7
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 5.3e-18 95.1 67 68.7
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 5.3e-18 95.1 75 64.0
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 7.0e-18 94.7 92 56.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 7.0e-18 94.7 72 63.9
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 7.0e-18 94.7 72 63.9
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 7.0e-18 94.7 72 63.9
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 7.0e-18 94.7 80 60.0
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.2e-17 94.0 75 60.0
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 1.6e-17 93.6 66 68.2
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 2.0e-17 93.2 76 61.8
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.0e-17 93.2 74 62.2
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 2.6e-17 92.8 75 64.0
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 2.6e-17 92.8 127 46.5
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 2.6e-17 92.8 68 70.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 3.5e-17 92.4 96 50.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 3.5e-17 92.4 80 65.0
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 4.5e-17 92.0 85 56.5
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 4.5e-17 92.0 67 65.7
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 5.9e-17 91.7 67 67.2
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 5.9e-17 91.7 79 62.0
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 5.9e-17 91.7 118 47.5
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.0e-16 90.9 84 56.0
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.3e-16 90.5 88 53.4
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.3e-16 90.5 69 63.8
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.3e-16 90.5 113 47.8
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.3e-16 90.5 74 62.2
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.3e-16 90.5 97 52.6
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.7e-16 90.1 86 61.6
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.7e-16 90.1 66 68.2
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.2e-16 89.7 106 50.0
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.2e-16 89.7 80 61.2
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 2.9e-16 89.4 79 59.5
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 2.9e-16 89.4 93 50.5
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 5.0e-16 88.6 83 57.8
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.1e-15 87.4 92 50.0
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 5.5e-15 85.1 72 61.1
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 5.5e-15 85.1 70 55.7
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 7.2e-15 84.7 66 62.1
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 1.6e-14 83.6 72 59.7
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.6e-14 83.6 71 59.2
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 8.0e-14 81.3 63 61.9
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 8.8e-13 77.8 60 63.3
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.2e-12 77.4 66 57.6
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.5e-12 77.0 70 57.1
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 9.7e-12 74.3 109 41.3
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.7e-11 72.4 61 62.3
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 8.2e-11 71.2 85 45.9
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.4e-10 70.5 52 59.6
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.1e-10 68.9 62 58.1
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 5.3e-10 68.6 81 44.4
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 7.0e-10 68.2 85 44.7
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 9.1e-10 67.8 80 46.2
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 9.1e-10 67.8 80 47.5
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.0e-09 66.6 80 46.2
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.7e-09 66.2 80 46.2
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.3e-08 63.9 76 55.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.7e-08 63.5 97 41.2


User provided reference genes

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