Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 8.2e-140 500.4 249 100.0
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 6.2e-95 351.3 255 67.8
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 2.0e-93 346.3 242 72.3
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 7.5e-93 344.4 256 68.8
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 4.3e-88 328.6 254 66.5
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 8.6e-81 304.3 249 60.6
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 2.0e-77 293.1 250 60.0
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 4.9e-76 288.5 234 62.8
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 6.4e-76 288.1 245 58.0
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 1.1e-75 287.3 231 60.2
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.4e-75 287.0 231 60.6
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.4e-75 287.0 231 60.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 3.2e-75 285.8 243 59.3
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 7.1e-75 284.6 252 57.1
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 3.5e-74 282.3 245 58.8
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 6.0e-74 281.6 250 57.2
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 8.7e-73 277.7 236 59.3
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 1.9e-72 276.6 232 59.5
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.3e-72 275.8 243 57.6
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 3.3e-72 275.8 232 59.9
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 7.3e-72 274.6 249 57.0
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 6.9e-70 268.1 234 59.4
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 7.6e-69 264.6 247 55.9
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 3.8e-68 262.3 240 55.8
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 8.4e-68 261.2 235 57.9
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.4e-67 260.4 238 58.0
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 7.1e-67 258.1 235 57.9
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 6.0e-66 255.0 241 55.2
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 7.8e-66 254.6 234 56.8
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 1.7e-65 253.4 257 51.4
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.6e-63 246.9 288 46.9
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 8.1e-63 244.6 249 53.4
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 4.0e-62 242.3 247 53.8
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 4.0e-62 242.3 237 54.9
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 6.9e-62 241.5 245 53.5
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 1.2e-61 240.7 239 54.0
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 3.4e-61 239.2 226 56.6
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 5.8e-61 238.4 239 53.6
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 1.3e-60 237.3 252 52.0
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 8.4e-60 234.6 256 50.0
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.4e-59 233.0 253 51.8
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 5.4e-59 231.9 235 52.8
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 9.3e-59 231.1 234 53.4
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 1.2e-58 230.7 255 49.4
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 3.5e-58 229.2 254 50.8
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 1.0e-57 227.6 238 51.7
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 1.3e-57 227.3 232 53.0
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 1.8e-57 226.9 248 49.6
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 2.3e-57 226.5 234 53.0
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 3.9e-57 225.7 243 52.7
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 6.7e-57 224.9 234 53.0
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 1.5e-56 223.8 254 46.5
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 1.3e-55 220.7 248 49.2
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 1.1e-54 217.6 229 52.4
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 1.8e-54 216.9 244 49.6
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 5.3e-54 215.3 240 48.3
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 1.5e-53 213.8 255 48.6
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 2.6e-53 213.0 255 48.6
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 5.8e-53 211.8 255 48.2
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 9.9e-53 211.1 257 48.6
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 2.2e-52 209.9 255 49.0
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 6.4e-52 208.4 238 50.0
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 8.4e-52 208.0 235 50.2
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 1.4e-51 207.2 215 53.5
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 3.2e-51 206.1 246 47.6
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.6e-50 203.8 234 50.0
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 4.6e-50 202.2 247 48.6
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 7.9e-50 201.4 240 49.6
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.3e-49 200.7 237 48.9
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.3e-49 200.7 244 45.9
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 1.8e-49 200.3 237 48.1
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 2.3e-49 199.9 259 47.5
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 3.0e-49 199.5 237 48.1
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 1.5e-48 197.2 255 45.5
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.9e-48 196.8 237 48.1
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.9e-48 196.8 237 48.1
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.9e-48 196.8 259 42.9
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 2.5e-48 196.4 242 47.1
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 2.5e-48 196.4 237 47.3
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 7.4e-48 194.9 239 46.0
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 6.2e-47 191.8 245 45.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 8.2e-47 191.4 243 44.9
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 3.1e-46 189.5 293 39.2
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 2.6e-45 186.4 249 43.4
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.3e-44 184.1 249 41.8
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 6.0e-42 175.3 289 36.7
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 2.5e-40 169.9 334 32.6
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 2.8e-39 166.4 194 50.0
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 3.7e-39 166.0 162 54.3
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 2.0e-37 160.2 254 40.6
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 4.5e-37 159.1 157 52.9
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 5.9e-37 158.7 145 59.3
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.0e-36 155.6 135 58.5
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.9e-35 153.7 135 58.5
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 3.3e-32 142.9 227 38.8
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 4.1e-30 136.0 164 50.0
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 2.2e-28 130.2 93 67.7
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 8.5e-28 128.3 100 58.0
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.9e-27 127.1 143 48.3
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.2e-21 107.8 185 35.1
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 3.4e-21 106.3 96 56.2
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 8.2e-15 85.1 110 44.5
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 7.0e-14 82.0 229 28.8
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.8e-09 67.4 66 54.5
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 5.2e-09 65.9 274 24.1
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 9.7e-08 61.6 48 64.6
SGA_v2.0_scaffold105G30406 Striga asiatica HOM05D007273 ORTHO05D009230 3.1e-06 56.6 50 54.0


User provided reference genes

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