Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 0.0e+00 2190.2 1113 100.0
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 0.0e+00 1491.5 1114 67.9
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 0.0e+00 1448.3 1116 65.8
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 0.0e+00 1187.9 1146 55.9
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 0.0e+00 1155.6 1139 55.3
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 0.0e+00 1107.0 1118 52.7
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 0.0e+00 1080.5 1118 50.6
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 2.3e-306 1055.8 1119 51.2
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 1.2e-302 1043.5 1110 50.9
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.0e-302 1042.7 1113 50.3
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 4.1e-300 1035.0 1128 48.8
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 7.1e-300 1034.2 1146 48.7
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 1.5e-297 1026.5 1106 49.4
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 5.8e-294 1014.6 1103 48.5
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 2.9e-293 1012.3 1113 48.1
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 6.4e-293 1011.1 1134 48.5
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 3.2e-292 1008.8 1135 48.0
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 9.2e-292 1007.3 1132 48.3
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 1.0e-290 1003.8 1130 47.8
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.9e-289 999.6 1117 47.9
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 6.2e-288 994.6 1117 47.9
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 9.9e-286 987.3 1121 47.7
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 1.7e-285 986.5 1079 49.4
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 6.4e-285 984.6 1143 47.2
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 6.4e-285 984.6 1121 47.5
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.4e-284 982.6 1122 47.7
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 9.3e-284 980.7 1111 46.9
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 2.1e-283 979.5 1122 47.4
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 7.3e-281 971.1 1129 46.9
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 2.4e-279 966.1 1097 47.7
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 3.4e-278 962.2 1120 45.7
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 5.4e-276 954.9 1113 46.5
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 2.3e-274 949.5 1126 46.7
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.9e-273 946.4 1134 45.1
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 9.6e-273 944.1 1134 45.1
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 1.1e-271 940.6 1114 46.1
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 1.8e-271 939.9 1120 47.1
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.8e-271 939.9 1105 45.2
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 9.0e-271 937.6 1103 44.9
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 1.5e-270 936.8 1105 45.8
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 9.3e-268 927.5 1125 45.0
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 7.9e-267 924.5 1141 45.4
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 9.6e-265 917.5 1138 45.2
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.4e-263 913.7 1118 44.6
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 4.9e-261 905.2 1133 43.7
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 3.2e-260 902.5 1142 44.5
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 5.5e-260 901.7 944 51.7
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 7.9e-259 897.9 1039 46.2
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 2.3e-258 896.3 1123 43.8
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 3.0e-258 896.0 1060 45.7
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 8.7e-258 894.4 1052 46.0
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 2.8e-256 889.4 1136 44.0
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 6.3e-256 888.3 1100 45.5
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 8.2e-256 887.9 1114 43.2
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 2.4e-255 886.3 1136 44.1
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 5.3e-255 885.2 1120 43.5
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 6.9e-255 884.8 1150 42.3
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 6.5e-253 878.2 1130 42.7
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 5.5e-252 875.2 1152 42.1
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 5.5e-252 875.2 1168 42.6
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 9.3e-252 874.4 1125 42.4
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 2.7e-251 872.8 1150 42.1
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 4.6e-251 872.1 1134 43.4
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.7e-248 862.4 929 49.5
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 3.7e-248 862.4 1112 44.6
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 1.5e-246 857.1 1132 42.8
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.7e-243 846.3 1117 42.9
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 8.2e-240 834.7 1123 42.2
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.0e-237 825.5 953 48.3
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.6e-230 803.9 1152 39.4
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 2.2e-229 800.0 1123 42.2
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.2e-227 794.3 971 45.1
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 1.0e-226 791.2 825 49.7
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 1.4e-223 780.8 1173 40.2
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 2.7e-222 776.5 1004 43.6
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 2.9e-221 773.1 1143 37.9
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.6e-217 760.0 901 45.8
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 5.7e-209 732.3 941 42.5
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 3.8e-205 719.5 790 48.7
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 1.7e-197 694.1 1005 39.8
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 9.9e-185 651.7 1124 38.1
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 3.4e-177 626.7 729 46.1
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 6.9e-170 602.4 817 43.6
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.3e-165 588.2 791 41.1
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 1.0e-157 562.0 626 46.5
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 4.0e-154 550.1 766 40.9
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.6e-150 538.1 950 37.8
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 2.3e-133 481.1 1176 29.8
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 6.3e-131 473.0 1368 26.9
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.8e-117 428.3 716 36.3
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 4.2e-111 407.1 446 48.0
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.7e-110 404.4 458 48.7
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.3e-88 331.6 408 45.3
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 2.0e-84 318.5 338 48.8
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 4.4e-84 317.4 343 49.0
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 7.5e-84 316.6 1248 25.9
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.9e-82 312.0 294 53.4
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 6.6e-80 303.5 331 49.2
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 2.3e-77 295.0 293 52.6
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 2.3e-77 295.0 298 52.0
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 8.9e-77 293.1 344 45.9
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.4e-74 285.8 590 32.9
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 2.1e-73 282.0 289 50.9
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 5.8e-60 237.3 395 38.5
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 6.4e-51 207.2 229 49.3
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 3.9e-48 198.0 512 32.8
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 5.6e-47 194.1 205 47.3
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 6.9e-45 187.2 142 61.3
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 1.9e-42 179.1 199 51.3
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 7.1e-42 177.2 203 45.8
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.4e-37 162.9 261 36.0
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 9.0e-37 160.2 250 36.8
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 2.9e-35 155.2 171 46.8
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 1.3e-32 146.4 138 50.0
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.5e-31 142.1 369 31.4
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 2.0e-28 132.5 311 31.2
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 4.9e-27 127.9 455 23.5
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 5.5e-26 124.4 137 50.4
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 9.7e-23 113.6 127 52.0
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 3.1e-21 108.6 116 46.6
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.1e-21 108.6 116 46.6
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.5e-20 106.3 116 45.7
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 3.8e-19 101.7 168 39.3
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.1e-16 91.3 88 55.7
MCO09G818 Micromonas commoda HOM05D005711 ORTHO05D007125 1.4e-10 73.2 367 22.9
SEGI_21308 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.4e-10 73.2 86 40.7
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.1e-09 69.3 136 33.1
BolC4t25036H Brassica oleracea HOM05D005711 ORTHO05D040726 8.2e-06 57.4 109 34.9


User provided reference genes

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