Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 3.7e-191 671.4 340 100.0
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 1.2e-88 330.9 271 69.4
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 6.9e-81 305.1 320 58.4
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 5.8e-80 302.0 271 66.4
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 7.7e-72 275.0 320 55.9
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 4.2e-70 269.2 271 62.4
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 4.1e-65 252.7 302 51.7
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.3e-58 231.1 282 54.6
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 4.1e-57 226.1 270 55.2
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 5.3e-57 225.7 278 54.3
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 5.3e-57 225.7 268 54.1
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.2e-56 224.6 278 54.0
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 4.5e-56 222.6 278 52.5
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 4.2e-54 216.1 273 52.0
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 3.6e-53 213.0 303 48.2
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 1.4e-52 211.1 271 52.4
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.4e-52 211.1 272 52.9
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 1.8e-52 210.7 277 52.0
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 1.8e-52 210.7 285 49.1
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 1.7e-50 204.1 300 50.3
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 1.7e-50 204.1 271 51.7
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 8.2e-50 201.8 271 50.9
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 9.1e-49 198.4 311 47.9
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 1.2e-48 198.0 271 50.6
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 1.6e-48 197.6 269 49.8
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 2.0e-48 197.2 272 50.7
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 2.0e-48 197.2 267 50.9
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 3.5e-48 196.4 270 49.6
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 3.5e-48 196.4 272 49.6
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 3.5e-48 196.4 273 50.5
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 4.5e-48 196.1 271 49.4
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 7.7e-48 195.3 278 50.7
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.9e-47 193.4 267 49.8
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 3.8e-47 193.0 279 48.0
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 5.0e-47 192.6 299 48.5
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 6.5e-47 192.2 259 51.0
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 1.1e-46 191.4 277 50.5
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 1.5e-46 191.0 269 50.6
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 5.5e-46 189.1 273 49.8
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 7.2e-46 188.7 269 49.4
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 9.4e-46 188.3 274 48.5
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 9.4e-46 188.3 267 49.1
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 1.2e-45 188.0 321 45.5
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 1.6e-45 187.6 269 50.2
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 4.7e-45 186.0 289 47.8
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.8e-44 184.1 271 48.7
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 1.2e-43 181.4 276 48.6
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 2.0e-43 180.6 296 47.3
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 3.4e-43 179.9 216 52.3
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 7.5e-43 178.7 171 63.7
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 2.8e-42 176.8 274 50.0
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 3.7e-42 176.4 276 46.7
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 4.8e-42 176.0 241 49.0
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 6.3e-42 175.6 271 48.0
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 1.1e-41 174.9 270 49.3
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.1e-41 173.3 280 46.4
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 7.0e-41 172.2 272 47.1
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 9.1e-41 171.8 287 47.4
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 1.2e-40 171.4 279 45.9
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 1.6e-40 171.0 270 47.0
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.0e-40 170.6 230 50.4
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 3.5e-40 169.9 270 47.8
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 4.5e-40 169.5 275 47.3
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 7.7e-40 168.7 282 45.7
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 1.0e-39 168.3 286 43.7
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 1.7e-39 167.5 229 49.3
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 2.9e-39 166.8 265 45.7
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 6.5e-39 165.6 275 44.7
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 1.9e-38 164.1 278 43.9
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 3.2e-38 163.3 267 47.2
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 7.2e-38 162.2 272 46.7
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 2.1e-37 160.6 267 46.1
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 2.1e-37 160.6 280 43.9
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 2.7e-37 160.2 285 47.0
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 2.7e-37 160.2 285 47.0
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 2.7e-37 160.2 273 47.6
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 2.7e-37 160.2 272 47.4
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 3.6e-37 159.8 272 47.4
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 3.6e-37 159.8 258 46.9
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 1.4e-36 157.9 273 42.1
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.4e-36 157.9 281 42.7
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 1.8e-36 157.5 270 43.7
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 6.8e-36 155.6 271 46.5
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.2e-35 154.8 277 44.0
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 1.2e-35 154.8 270 47.0
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.2e-35 154.8 268 42.9
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.2e-35 154.8 263 43.0
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.2e-35 154.8 263 43.0
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 1.5e-35 154.5 267 41.9
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 2.0e-35 154.1 270 43.3
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 2.0e-35 154.1 208 47.6
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.6e-35 153.7 303 38.9
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 4.4e-35 152.9 268 43.7
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 2.8e-34 150.2 270 46.3
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 2.8e-34 150.2 283 42.0
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 3.7e-34 149.8 273 41.8
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 4.9e-34 149.4 273 45.4
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 1.1e-33 148.3 264 42.8
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 1.1e-33 148.3 259 43.2
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 5.4e-33 146.0 264 42.4
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 7.0e-33 145.6 264 41.7
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 9.1e-33 145.2 271 45.4
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 1.2e-32 144.8 276 40.9
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 1.2e-32 144.8 274 42.7
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 1.2e-32 144.8 282 44.3
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.0e-32 144.1 267 43.4
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 4.5e-32 142.9 230 43.5
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 4.5e-32 142.9 269 42.4
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.9e-32 142.5 264 42.8
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 5.9e-32 142.5 284 41.5
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 7.7e-32 142.1 275 40.4
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 1.0e-31 141.7 264 41.3
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 2.3e-31 140.6 199 51.8
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 2.3e-31 140.6 268 42.9
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 5.0e-31 139.4 267 40.1
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 1.1e-30 138.3 276 43.1
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.1e-30 138.3 269 41.6
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.1e-30 138.3 269 41.6
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 1.5e-30 137.9 272 41.9
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 1.9e-30 137.5 269 40.1
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 1.9e-30 137.5 269 40.1
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 2.5e-30 137.1 276 42.8
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.3e-30 136.3 268 41.0
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 5.6e-30 136.0 275 40.7
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 5.6e-30 136.0 275 40.7
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 7.2e-30 135.6 158 53.2
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.2e-30 135.6 263 42.6
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 7.2e-30 135.6 192 51.0
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.2e-29 134.8 273 41.8
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 2.1e-29 134.0 269 40.1
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 3.6e-29 133.3 175 53.7
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 8.0e-29 132.1 286 40.2
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 8.0e-29 132.1 275 41.5
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 8.0e-29 132.1 269 40.9
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.0e-28 131.7 278 40.6
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 1.8e-28 131.0 267 42.3
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 3.0e-28 130.2 172 51.2
unitig_26.g8909 Utricularia gibba HOM05D003503 ORTHO05D003885 4.0e-28 129.8 150 56.7
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 6.8e-28 129.0 179 49.7
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.5e-27 127.9 203 43.8
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.5e-27 127.9 173 50.3
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.3e-26 124.8 274 38.3
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 1.7e-26 124.4 215 46.5
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 2.2e-26 124.0 257 40.1
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 4.9e-26 122.9 173 48.0
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 6.4e-26 122.5 151 52.3
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 6.4e-26 122.5 272 37.9
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 6.4e-26 122.5 207 43.5
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 1.1e-25 121.7 246 39.4
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 4.1e-25 119.8 264 37.5
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 5.4e-25 119.4 163 48.5
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 5.4e-25 119.4 206 42.2
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 7.0e-25 119.0 272 39.0
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 9.2e-25 118.6 277 39.4
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 1.0e-23 115.2 272 36.8
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 2.3e-23 114.0 196 48.5
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 1.1e-22 111.7 207 39.1
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.1e-22 111.7 121 54.5
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 1.6e-21 107.8 276 35.5
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 1.0e-20 105.1 266 35.7
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 4.0e-20 103.2 137 47.4
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 8.9e-20 102.1 264 34.8
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 9.8e-19 98.6 269 33.8
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 6.4e-18 95.9 274 32.8
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.9e-17 94.4 274 33.6
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 7.0e-17 92.4 193 37.3
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 2.0e-16 90.9 202 36.6
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 9.5e-14 82.0 81 61.7
PGR031G3517 Punica granatum HOM05D003503 ORTHO05D003885 1.1e-12 78.6 376 27.4
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 8.9e-12 75.5 70 57.1
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 2.2e-10 70.9 168 33.9
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 4.9e-10 69.7 165 35.8
BolC7t41959H Brassica oleracea HOM05D003503 ORTHO05D003885 2.4e-09 67.4 128 35.9
C04p28750 Brassica napus HOM05D003503 ORTHO05D003885 1.3e-07 61.6 95 40.0
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 2.3e-07 60.8 230 33.9
ECA234G0160 Erigeron canadensis HOM05D003503 ORTHO05D003885 3.0e-07 60.5 59 55.9
CSS0008617 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 5.1e-07 59.7 87 42.5
RcHm_v2.0_Chr7g0219161 Rosa chinensis HOM05D003503 ORTHO05D003885 1.9e-06 57.8 101 39.6
Actinidia09377 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.3e-06 57.0 74 54.1
Phvul.008G153400 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 4.3e-06 56.6 84 47.6
CDE05G1889 Ceratophyllum demersum HOM05D003503 ORTHO05D003885 9.5e-06 55.5 174 31.0
Phvul.011G101601 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 9.5e-06 55.5 85 47.1


User provided reference genes

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