Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 9.2e-69 263.5 135 100.0
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.7e-44 182.2 139 73.4
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.7e-44 182.2 139 73.4
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 3.2e-37 158.7 146 65.1
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 5.6e-34 147.9 152 60.5
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.2e-33 146.7 136 58.8
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 2.0e-31 139.4 126 61.1
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.3e-30 136.7 136 56.6
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 2.9e-30 135.6 132 57.6
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 4.2e-29 131.7 135 56.3
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 1.3e-27 126.7 137 50.4
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 3.0e-27 125.6 158 44.9
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 1.6e-25 119.8 135 49.6
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 8.1e-25 117.5 141 52.5
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 8.1e-25 117.5 135 50.4
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 1.1e-24 117.1 139 54.7
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 1.4e-24 116.7 138 52.2
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.8e-24 116.3 136 50.0
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 3.1e-24 115.5 134 50.0
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 5.3e-24 114.8 138 51.4
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 5.3e-24 114.8 138 51.4
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 9.0e-24 114.0 149 46.3
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 9.0e-24 114.0 140 49.3
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 2.6e-23 112.5 124 51.6
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 2.6e-23 112.5 123 54.5
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 1.7e-22 109.8 150 46.7
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.7e-22 109.8 152 45.4
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.2e-22 109.4 151 47.0
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 2.2e-22 109.4 154 41.6
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 2.9e-22 109.0 122 53.3
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 6.4e-22 107.8 150 46.7
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 1.1e-21 107.1 149 46.3
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 1.9e-21 106.3 146 45.9
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 3.2e-21 105.5 143 46.9
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 4.2e-21 105.1 137 48.9
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 4.2e-21 105.1 150 46.0
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 7.1e-21 104.4 128 49.2
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 1.2e-20 103.6 140 45.7
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.6e-20 103.2 135 47.4
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 1.6e-20 103.2 148 43.2
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 2.1e-20 102.8 138 47.8
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 2.7e-20 102.4 141 43.3
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 3.5e-20 102.1 144 43.1
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 3.5e-20 102.1 148 44.6
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 1.3e-19 100.1 138 47.8
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 1.3e-19 100.1 133 45.1
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 2.3e-19 99.4 133 44.4
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 3.0e-19 99.0 131 43.5
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 5.1e-19 98.2 140 45.0
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 5.1e-19 98.2 138 47.8
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 6.7e-19 97.8 132 48.5
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 8.7e-19 97.4 133 49.6
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 8.7e-19 97.4 133 43.6
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 1.9e-18 96.3 132 42.4
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 2.5e-18 95.9 131 48.1
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 5.6e-18 94.7 132 43.2
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 5.6e-18 94.7 125 47.2
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 5.6e-18 94.7 134 40.3
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 7.4e-18 94.4 135 44.4
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 9.6e-18 94.0 137 45.3
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 9.6e-18 94.0 137 45.3
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 9.6e-18 94.0 137 45.3
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 9.6e-18 94.0 124 46.8
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 4.8e-17 91.7 133 39.8
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 4.8e-17 91.7 136 39.0
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 6.2e-17 91.3 131 47.3
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 8.1e-17 90.9 134 39.6
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 8.1e-17 90.9 125 47.2
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 8.1e-17 90.9 126 46.8
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 1.4e-16 90.1 128 41.4
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.8e-16 89.7 137 43.8
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 2.4e-16 89.4 130 40.8
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 3.1e-16 89.0 75 54.7
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 4.0e-16 88.6 151 37.7
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 9.0e-16 87.4 129 43.4
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 1.5e-15 86.7 138 39.9
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 1.5e-15 86.7 127 40.2
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 2.6e-15 85.9 130 40.8
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 3.4e-15 85.5 131 39.7
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 3.4e-15 85.5 131 39.7
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 2.2e-14 82.8 130 38.5
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 2.2e-14 82.8 130 38.5
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 2.2e-14 82.8 130 38.5
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 2.2e-14 82.8 158 38.6
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 2.9e-14 82.4 140 38.6
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 4.9e-14 81.6 127 38.6
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 4.9e-14 81.6 130 38.5
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 4.9e-14 81.6 130 38.5
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 6.4e-14 81.3 134 38.1
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 8.4e-14 80.9 133 36.1
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 1.4e-13 80.1 137 37.2
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 3.2e-13 79.0 134 35.1
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 5.5e-13 78.2 131 43.5
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 3.5e-12 75.5 131 40.5
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 1.0e-11 73.9 152 34.2
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 3.0e-11 72.4 124 39.5
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 1.1e-10 70.5 127 38.6
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 1.1e-10 70.5 131 36.6
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 1.6e-09 66.6 136 37.5
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 2.1e-09 66.2 170 30.0
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 3.7e-09 65.5 151 35.8
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 1.8e-08 63.2 77 42.9
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 7.6e-07 57.8 159 33.3
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 1.7e-06 56.6 147 30.6
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 1.7e-06 56.6 49 55.1
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 2.9e-06 55.8 91 34.1
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 3.8e-06 55.5 128 32.0


User provided reference genes

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