Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 3.6e-149 531.6 266 100.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 4.1e-105 385.2 199 89.9
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.0e-103 380.6 231 79.7
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 6.6e-103 377.9 261 72.4
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 2.5e-102 375.9 272 69.1
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.2e-101 373.6 245 73.5
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.6e-101 373.2 243 77.0
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.6e-101 372.1 251 75.7
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 4.7e-101 371.7 246 74.0
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 6.1e-101 371.3 256 73.8
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.0e-100 370.5 265 70.2
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.0e-100 369.0 209 82.3
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 6.8e-100 367.9 228 77.6
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 8.9e-100 367.5 209 82.3
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.5e-99 366.7 209 81.3
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 3.4e-99 365.5 217 78.8
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 5.7e-99 364.8 261 69.7
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 7.5e-99 364.4 198 84.3
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.7e-98 363.2 267 68.5
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 2.2e-98 362.8 193 87.0
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 2.9e-98 362.5 256 69.5
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.7e-98 362.1 263 68.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 3.7e-98 362.1 231 75.8
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 4.9e-98 361.7 200 83.5
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 4.9e-98 361.7 261 70.1
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 4.9e-98 361.7 205 82.4
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 4.9e-98 361.7 205 82.4
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 8.3e-98 360.9 237 74.7
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 8.3e-98 360.9 197 84.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.4e-97 360.1 230 73.9
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.4e-97 360.1 230 73.9
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 3.2e-97 359.0 206 80.6
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 4.1e-97 358.6 195 84.1
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 9.2e-97 357.5 203 81.8
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 9.2e-97 357.5 199 82.9
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 9.2e-97 357.5 242 71.9
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.2e-96 357.1 263 68.1
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.2e-96 357.1 195 84.6
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.6e-96 356.7 194 85.1
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 2.0e-96 356.3 267 68.2
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.0e-96 356.3 232 74.1
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 2.0e-96 356.3 229 73.4
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 3.5e-96 355.5 196 83.7
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 5.9e-96 354.8 256 69.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 5.9e-96 354.8 235 72.3
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 7.8e-96 354.4 260 68.5
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 7.8e-96 354.4 239 71.1
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 7.8e-96 354.4 194 85.1
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 7.8e-96 354.4 240 72.1
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.0e-95 354.0 253 70.0
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 1.0e-95 354.0 274 64.6
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.7e-95 353.2 230 72.6
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 3.0e-95 352.4 245 70.2
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.1e-94 350.5 254 68.5
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 2.5e-94 349.4 245 70.2
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.5e-94 349.4 194 82.5
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 3.3e-94 349.0 239 72.0
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 9.5e-94 347.4 198 80.3
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 9.5e-94 347.4 210 79.0
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.6e-93 346.7 252 68.3
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 3.6e-93 345.5 198 79.3
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.8e-92 343.2 244 69.7
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 4.0e-92 342.0 198 79.8
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 6.8e-92 341.3 265 64.2
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 8.9e-92 340.9 198 78.3
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.2e-91 340.5 231 73.2
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.5e-91 340.1 255 67.1
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 4.4e-91 338.6 225 72.4
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.3e-90 337.0 258 64.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.3e-90 337.0 259 63.3
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 1.1e-89 334.0 242 66.5
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.4e-89 332.8 195 79.5
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 5.4e-89 331.6 240 68.8
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.7e-88 329.3 243 66.3
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.7e-88 329.3 243 66.3
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.7e-88 329.3 198 77.3
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 3.5e-88 328.9 249 62.7
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.7e-87 326.6 194 75.8
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 1.5e-86 323.6 203 73.9
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.2e-85 320.5 247 64.4
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 2.1e-85 319.7 270 62.6
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 4.4e-83 312.0 239 64.9
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 4.4e-83 312.0 227 65.2
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.9e-82 309.3 264 61.4
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 2.9e-82 309.3 227 65.2
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.4e-81 306.2 264 61.0
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 3.2e-81 305.8 237 65.8
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 3.2e-81 305.8 329 52.9
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 4.1e-81 305.4 265 59.6
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.6e-80 302.0 189 75.7
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.5e-78 297.0 301 58.8
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 9.5e-78 294.3 166 81.3
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.8e-76 290.0 166 79.5
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.8e-74 282.3 161 80.7
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-73 279.6 249 56.2
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 9.0e-68 261.2 204 65.7
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 5.4e-65 251.9 205 63.9
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 3.8e-58 229.2 120 90.0
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.1e-56 223.4 142 75.4
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 6.2e-53 211.8 124 79.8
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 5.3e-52 208.8 174 64.4
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 1.3e-50 204.1 233 53.2
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 2.3e-47 193.4 197 55.3
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 6.7e-47 191.8 170 59.4
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 5.6e-46 188.7 247 47.4
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 6.9e-44 181.8 101 84.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.9e-42 176.4 157 59.9
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.9e-39 166.0 96 79.2
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 5.1e-39 165.6 453 30.2
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.0e-35 153.7 216 45.4
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 2.9e-34 149.8 72 94.4
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 9.7e-30 134.8 76 75.0
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 4.1e-28 129.4 72 77.8
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.3e-18 97.8 96 54.2
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 64.3 56 58.9


User provided reference genes

Program Settings