Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 7.8e-101 370.5 197 100.0
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 1.7e-92 342.8 197 91.9
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.3e-87 326.6 189 89.4
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 7.0e-86 320.9 197 86.3
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 7.0e-86 320.9 198 85.9
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 3.0e-84 315.5 197 84.3
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.1e-82 309.3 197 82.7
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 2.1e-82 309.3 197 81.7
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.8e-82 308.9 197 83.8
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 2.3e-81 305.8 198 83.3
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 5.2e-81 304.7 197 84.3
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.2e-80 303.5 197 81.7
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 7.5e-80 300.8 196 80.1
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 7.5e-80 300.8 196 80.1
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 7.5e-80 300.8 196 80.1
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 2.2e-79 299.3 193 81.9
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 2.9e-79 298.9 193 81.9
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 2.9e-79 298.9 192 82.8
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 2.9e-79 298.9 195 80.5
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 4.9e-79 298.1 193 81.3
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 4.9e-79 298.1 196 80.6
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 4.9e-79 298.1 197 78.7
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 6.4e-79 297.7 192 82.3
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 8.3e-79 297.4 196 79.6
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.1e-78 297.0 197 81.2
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 1.9e-78 296.2 197 77.7
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.4e-78 295.8 197 80.7
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.4e-78 295.8 197 77.2
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 4.1e-78 295.0 197 80.7
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 4.1e-78 295.0 193 80.8
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 7.1e-78 294.3 197 79.7
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 9.2e-78 293.9 194 80.9
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 9.2e-78 293.9 197 80.2
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 1.2e-77 293.5 197 80.7
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.2e-77 293.5 194 79.9
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 1.2e-77 293.5 192 81.8
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.6e-77 293.1 194 80.9
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 1.6e-77 293.1 195 80.5
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.6e-77 293.1 192 81.2
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 1.6e-77 293.1 192 81.2
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.1e-77 292.7 196 78.1
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.1e-77 292.7 197 76.6
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 2.7e-77 292.4 194 80.9
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.5e-77 292.0 194 80.9
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 4.6e-77 291.6 194 80.4
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 4.6e-77 291.6 197 81.2
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 4.6e-77 291.6 194 78.9
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 6.0e-77 291.2 193 80.8
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 6.0e-77 291.2 194 80.9
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 6.0e-77 291.2 192 80.7
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 7.8e-77 290.8 191 79.6
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 1.0e-76 290.4 194 79.9
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 1.0e-76 290.4 196 78.6
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 1.0e-76 290.4 192 80.7
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 2.3e-76 289.3 193 78.8
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 3.0e-76 288.9 197 77.7
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 3.9e-76 288.5 194 80.4
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 5.1e-76 288.1 194 78.9
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 8.6e-76 287.3 194 78.9
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 8.6e-76 287.3 194 78.9
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.1e-75 287.0 197 77.2
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 1.5e-75 286.6 193 79.3
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 1.9e-75 286.2 194 78.4
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 1.9e-75 286.2 195 77.4
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 2.5e-75 285.8 192 79.2
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 4.3e-75 285.0 192 79.7
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 5.6e-75 284.6 195 76.4
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 9.6e-75 283.9 191 80.1
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 1.2e-74 283.5 194 77.3
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 2.1e-74 282.7 193 77.2
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 2.1e-74 282.7 192 79.2
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 3.6e-74 282.0 195 76.4
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 4.7e-74 281.6 191 79.6
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 4.7e-74 281.6 191 79.6
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 6.2e-74 281.2 195 76.9
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 8.1e-74 280.8 191 79.6
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 1.4e-73 280.0 191 78.5
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.8e-73 279.6 195 75.4
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 1.8e-73 279.6 191 78.5
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 5.2e-73 278.1 191 78.0
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 6.8e-73 277.7 191 78.0
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 1.2e-72 276.9 192 75.5
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 1.2e-72 276.9 197 74.1
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 1.2e-72 276.9 191 78.0
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 1.5e-72 276.6 191 77.0
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 6.4e-71 271.2 198 74.7
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 4.2e-70 268.5 197 70.6
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 9.3e-70 267.3 193 74.6
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 9.3e-70 267.3 193 74.6
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 1.6e-69 266.5 193 75.1
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 2.7e-69 265.8 193 74.1
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 3.5e-69 265.4 189 75.1
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 4.6e-69 265.0 178 78.1
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 7.8e-69 264.2 184 76.6
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 1.3e-66 256.9 193 72.5
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 1.3e-66 256.9 174 78.7
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 6.2e-66 254.6 193 71.5
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 1.4e-65 253.4 188 71.8
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.4e-65 253.4 189 68.3
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 9.0e-65 250.8 193 70.5
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 5.8e-64 248.1 188 69.1
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 5.8e-64 248.1 190 71.6
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 9.3e-62 240.7 200 66.0
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 2.1e-61 239.6 191 66.0
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 3.5e-61 238.8 198 65.7
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 2.3e-60 236.1 208 63.0
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 2.1e-58 229.6 187 65.8
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 6.4e-55 218.0 188 60.6
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 4.6e-53 211.8 139 78.4
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 6.0e-53 211.5 195 65.1
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.3e-52 210.3 199 61.3
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 3.3e-51 205.7 130 81.5
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 1.6e-50 203.4 131 80.2
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 2.6e-48 196.1 169 65.1
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.4e-46 190.3 197 57.9
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 4.3e-43 178.7 199 54.3
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.2e-40 170.6 129 74.4
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 1.1e-38 164.1 101 77.2
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 1.2e-37 160.6 118 72.9
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 3.0e-36 156.0 137 63.5
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 1.5e-32 143.7 169 43.2
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 2.0e-27 126.7 138 55.1
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 4.3e-27 125.6 107 63.6
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 1.7e-26 123.6 94 66.0
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 1.4e-25 120.6 106 60.4
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 2.1e-21 106.7 88 65.9
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 8.2e-18 94.7 65 78.5
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 1.1e-17 94.4 179 32.4
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 1.2e-16 90.9 54 92.6
SGA_v2.0_scaffold472G52090 Striga asiatica HOM05D005910 ORTHO05D007088 2.0e-16 90.1 54 92.6
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 2.6e-16 89.7 83 63.9
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.7e-15 87.0 45 88.9
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 5.0e-15 85.5 165 31.5
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 2.2e-10 70.1 62 56.5
SGA_v2.0_scaffold105G30513 Striga asiatica HOM05D000825 ORTHO05D002486 8.5e-07 58.2 83 57.8


User provided reference genes

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