Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 5.4e-139 497.7 255 100.0
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 3.2e-70 269.2 257 59.9
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 4.9e-63 245.4 259 58.3
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.3e-49 199.9 259 50.2
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 2.1e-45 186.8 261 47.5
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 8.1e-42 174.9 258 47.3
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 2.0e-40 170.2 292 41.4
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 3.6e-34 149.4 288 38.2
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 1.4e-33 147.5 268 41.4
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 4.6e-29 132.5 251 40.6
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.0e-28 129.8 277 36.8
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 8.7e-28 128.3 265 38.9
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 1.9e-27 127.1 274 37.2
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 5.6e-27 125.6 260 34.2
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 9.6e-27 124.8 130 52.3
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 1.6e-26 124.0 313 37.4
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.6e-26 124.0 275 36.7
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 4.8e-26 122.5 189 42.9
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 6.2e-26 122.1 169 44.4
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.4e-25 120.9 276 37.3
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.4e-25 120.2 202 41.1
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.4e-25 120.2 268 35.8
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 9.0e-25 118.2 260 36.9
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 1.2e-24 117.9 275 34.9
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 3.4e-24 116.3 289 32.9
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 4.5e-24 115.9 280 33.2
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 9.9e-24 114.8 262 34.7
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 9.9e-24 114.8 275 35.3
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 1.3e-23 114.4 262 34.4
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 1.7e-23 114.0 261 34.1
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 1.7e-23 114.0 300 33.7
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 2.2e-23 113.6 267 34.1
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 2.9e-23 113.2 258 34.5
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 4.9e-23 112.5 261 34.1
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 4.9e-23 112.5 293 32.4
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.1e-22 111.3 271 33.9
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 1.9e-22 110.5 302 33.4
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 2.4e-22 110.2 268 34.7
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 3.2e-22 109.8 148 46.6
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 3.2e-22 109.8 301 34.6
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 3.2e-22 109.8 278 36.7
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 5.4e-22 109.0 257 36.6
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 7.1e-22 108.6 262 31.3
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 9.3e-22 108.2 130 46.2
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 4.6e-21 105.9 260 31.2
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 6.0e-21 105.5 299 34.4
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.8e-20 104.0 260 35.0
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 2.3e-20 103.6 252 33.7
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 2.3e-20 103.6 257 33.1
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 2.3e-20 103.6 277 34.7
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 3.0e-20 103.2 151 45.0
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 5.1e-20 102.4 262 34.7
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 5.1e-20 102.4 160 41.9
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 5.1e-20 102.4 304 30.9
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 8.7e-20 101.7 261 34.1
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.1e-19 101.3 266 33.5
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 1.5e-19 100.9 267 32.2
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 2.5e-19 100.1 140 44.3
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 1.3e-18 97.8 275 33.1
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 4.8e-18 95.9 282 33.0
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 6.2e-18 95.5 259 36.3
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 6.2e-18 95.5 249 35.3
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 8.1e-18 95.1 293 31.1
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.1e-17 94.7 288 32.3
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 1.1e-17 94.7 239 34.7
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.1e-17 94.7 280 27.9
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.8e-17 94.0 266 32.3
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 1.8e-17 94.0 294 28.9
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 3.1e-17 93.2 292 31.2
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 5.3e-17 92.4 269 30.5
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 6.9e-17 92.0 258 30.6
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 6.9e-17 92.0 294 30.6
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 9.0e-17 91.7 266 32.0
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 1.2e-16 91.3 282 31.2
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.5e-16 90.9 283 32.2
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.5e-16 90.9 280 27.9
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 2.6e-16 90.1 301 30.2
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 2.6e-16 90.1 274 31.4
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 3.4e-16 89.7 321 30.2
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.5e-16 89.4 98 51.0
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.5e-16 89.4 98 51.0
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 5.8e-16 89.0 268 31.3
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 5.8e-16 89.0 271 33.2
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.0e-15 88.2 278 30.2
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.7e-15 87.4 290 30.3
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.7e-15 87.4 286 33.6
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 1.7e-15 87.4 259 30.9
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 2.2e-15 87.0 141 41.8
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 2.2e-15 87.0 274 30.3
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.9e-15 86.7 266 31.6
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 3.8e-15 86.3 289 31.1
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.9e-15 85.9 132 43.2
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 4.9e-15 85.9 266 29.7
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 8.4e-15 85.1 262 29.8
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.4e-14 84.3 292 29.8
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.4e-14 84.3 177 37.3
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.9e-14 84.0 132 43.2
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 1.9e-14 84.0 251 33.5
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 4.2e-14 82.8 258 29.1
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 4.2e-14 82.8 258 29.1
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 7.1e-14 82.0 298 29.5
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 7.1e-14 82.0 120 46.7
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 9.3e-14 81.6 268 28.7
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 9.3e-14 81.6 297 28.3
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 1.2e-13 81.3 259 30.1
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.1e-13 80.5 144 38.2
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 2.7e-13 80.1 261 29.5
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 2.7e-13 80.1 299 30.8
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 3.5e-13 79.7 284 28.2
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 3.5e-13 79.7 265 27.2
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 6.0e-13 79.0 273 30.0
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 7.9e-13 78.6 285 29.8
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 1.0e-12 78.2 268 31.3
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.0e-12 78.2 269 29.0
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 1.0e-12 78.2 266 28.9
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 1.0e-12 78.2 277 26.0
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 1.0e-12 78.2 298 29.2
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 1.3e-12 77.8 131 35.1
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 1.3e-12 77.8 291 29.2
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.0e-12 76.6 298 26.2
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 3.0e-12 76.6 268 28.7
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 3.9e-12 76.3 269 28.6
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 3.9e-12 76.3 274 27.7
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 5.1e-12 75.9 303 29.4
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 8.7e-12 75.1 271 29.5
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.1e-11 74.7 277 27.8
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.1e-11 74.7 284 30.6
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.5e-11 74.3 267 29.2
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 1.5e-11 74.3 294 28.2
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.5e-11 74.3 297 30.0
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 1.9e-11 73.9 284 27.8
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 3.3e-11 73.2 266 28.6
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 3.3e-11 73.2 275 30.5
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 4.3e-11 72.8 286 29.7
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 5.7e-11 72.4 337 26.7
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 9.6e-11 71.6 299 27.8
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 1.6e-10 70.9 301 26.2
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.6e-10 70.9 293 29.0
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 1.6e-10 70.9 142 36.6
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 2.8e-10 70.1 275 26.2
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 8.2e-10 68.6 299 29.4
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 1.8e-09 67.4 299 27.8
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 2.4e-09 67.0 280 28.9
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.4e-09 67.0 279 27.2
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 3.1e-09 66.6 335 26.3
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 3.1e-09 66.6 119 39.5
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 5.3e-09 65.9 266 28.6
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 5.3e-09 65.9 273 27.1
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 9.0e-09 65.1 124 39.5
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.2e-08 64.7 290 25.5
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.5e-08 64.3 278 26.3
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 7.6e-08 62.0 261 29.5
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.3e-07 61.2 144 35.4
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 2.2e-07 60.5 276 29.7
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 3.8e-07 59.7 274 25.2
MSTRG.9456 Avicennia marina HOM05D003500 ORTHO05D003919 5.0e-07 59.3 77 51.9
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 1.1e-06 58.2 271 26.2
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 1.9e-06 57.4 260 26.5
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 1.9e-06 57.4 260 27.3
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 2.5e-06 57.0 267 25.8
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 2.5e-06 57.0 267 25.8
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 4.2e-06 56.2 277 24.9
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 5.5e-06 55.8 299 27.4
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 7.2e-06 55.5 278 26.6


User provided reference genes

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