Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22967 Striga asiatica HOM05D006250 ORTHO05D007107 5.6e-63 244.2 131 100.0
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 3.9e-56 221.5 119 100.0
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 2.1e-30 136.0 120 64.2
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 3.8e-27 125.2 118 60.2
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 4.2e-18 95.1 118 47.5
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 2.2e-11 72.8 124 42.7
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 2.1e-09 66.2 118 38.1
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 4.6e-09 65.1 121 38.8
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.8e-08 63.2 116 37.9
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.8e-08 63.2 116 37.9
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.8e-08 63.2 116 37.9
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.8e-08 63.2 116 37.9
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 3.0e-08 62.4 120 40.0
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 3.9e-08 62.0 118 35.6
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 6.7e-08 61.2 121 38.0
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 6.7e-08 61.2 123 38.2
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.9e-07 59.7 118 38.1
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.3e-07 58.5 123 39.8
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 5.7e-07 58.2 118 37.3
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 5.7e-07 58.2 118 37.3
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 9.7e-07 57.4 121 38.8
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.3e-06 57.0 120 40.0
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 1.6e-06 56.6 120 39.2
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.6e-06 56.6 123 39.0
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 2.2e-06 56.2 118 39.8
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.2e-06 56.2 121 39.7
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 8.2e-06 54.3 118 36.4
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 8.2e-06 54.3 121 35.5


User provided reference genes

Program Settings