Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 3.5e-214 748.0 383 100.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-39 166.4 342 35.7
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 7.2e-26 122.5 247 28.7
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 5.7e-23 112.8 414 28.7
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-21 107.8 318 28.9
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.3e-19 101.7 215 32.1
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.9e-18 97.8 159 34.6
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 4.6e-17 93.2 246 29.7
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 6.1e-17 92.8 141 34.0
SGA_v2.0_scaffold302G47838 Striga asiatica HOM05D044967 ORTHO05D000126 1.4e-16 91.7 254 29.9
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.1e-16 89.7 192 29.7
Nitab4.5_0002837g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 8.8e-16 89.0 192 29.7
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-15 87.8 336 26.5
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.6e-15 87.4 138 34.1
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 2.6e-15 87.4 149 32.2
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 1.3e-14 85.1 315 27.9
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 1.7e-14 84.7 153 35.3
Nitab4.5_0012359g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.2e-14 84.3 138 33.3
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 2.2e-14 84.3 185 33.5
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 2.8e-14 84.0 157 31.2
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.4e-13 81.6 156 30.8
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-13 81.3 138 34.1
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.1e-13 80.5 142 31.0
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-13 80.1 185 29.7
Cc00_g29920 Coffea canephora HOM05D000003 ORTHO05D000126 1.2e-12 78.6 110 39.1
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 1.2e-12 78.6 289 28.7
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.9e-12 76.3 155 31.6
SGA_v2.0_scaffold54G19489 Striga asiatica HOM05D010621 ORTHO05D000126 1.3e-11 75.1 257 26.5
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 2.2e-11 74.3 81 45.7
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 5.0e-11 73.2 198 29.3
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.0e-11 73.2 155 30.3
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-09 66.6 154 28.6
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-09 66.6 154 28.6
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 6.1e-09 66.2 119 35.3
Nitab4.5_0001659g0050 Nicotiana tabacum HOM05D007931 ORTHO05D014660 7.9e-09 65.9 168 27.4
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.0e-08 65.5 140 30.7
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.0e-08 65.5 141 27.0
QL04p035145 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-08 64.7 139 29.5
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-08 64.3 216 24.5
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 2.3e-08 64.3 96 36.5
Dinv18185 Davidia involucrata HOM05D000003 ORTHO05D000126 3.0e-08 63.9 124 32.3
Nitab4.5_0000894g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.0e-08 63.9 158 25.9
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.9e-08 63.5 125 28.8
SGA_v2.0_scaffold78G25389 Striga asiatica HOM05D002880 ORTHO05D003450 3.9e-08 63.5 49 57.1
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 5.2e-08 63.2 136 31.6
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 5.2e-08 63.2 218 25.7
QL01p041898 Quercus lobata HOM05D000003 ORTHO05D000126 5.2e-08 63.2 131 33.6
QL06p037254 Quercus lobata HOM05D000003 ORTHO05D000126 5.2e-08 63.2 137 29.9
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 6.7e-08 62.8 138 27.5
SGA_v2.0_scaffold23G10110 Striga asiatica HOM05D017601 ORTHO05D000006 8.8e-08 62.4 196 30.1
QL06p022045 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-07 62.0 141 29.8
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.5e-07 61.6 196 25.5
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 1.5e-07 61.6 118 30.5
SGA_v2.0_scaffold177G39429 Striga asiatica HOM05D016874 ORTHO05D398971 1.5e-07 61.6 193 30.1
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.6e-07 60.8 122 27.9
Nitab4.5_0004048g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.6e-07 60.8 116 31.9
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-07 60.8 140 28.6
QL05p070403 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-07 60.8 138 30.4
SGA_v2.0_scaffold54G19562 Striga asiatica HOM05D025057 ORTHO05D403339 2.6e-07 60.8 118 40.7
Atru.chr1.1793 Acer truncatum HOM05D000003 ORTHO05D000126 3.3e-07 60.5 126 32.5
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 3.3e-07 60.5 157 24.8
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 3.3e-07 60.5 118 31.4
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 4.4e-07 60.1 117 31.6
QL03p018940 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-07 60.1 127 34.6
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-07 59.7 138 28.3
QL05p068376 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-07 59.7 125 36.0
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 5.7e-07 59.7 173 28.9
QL10p043858 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-07 59.7 142 32.4
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 5.7e-07 59.7 316 24.1
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 5.7e-07 59.7 153 29.4
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 7.4e-07 59.3 142 29.6
QL05p001179 Quercus lobata HOM05D000003 ORTHO05D000126 7.4e-07 59.3 131 32.1
QL01p054112 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-07 58.9 133 33.1
QL01p054323 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-07 58.9 133 33.1
QL09p054237 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-07 58.9 167 26.9
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-07 58.9 206 26.7
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 1.3e-06 58.5 211 28.0
QL03p026642 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 58.5 138 27.5
SGA_v2.0_scaffold30G12435 Striga asiatica HOM05D025057 ORTHO05D404532 1.3e-06 58.5 120 40.0
SGA_v2.0_scaffold61G21290 Striga asiatica HOM05D044967 ORTHO05D406599 1.3e-06 58.5 116 30.2
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 58.2 332 24.7
QL10p065510 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 58.2 137 27.7
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.7e-06 58.2 155 30.3
Sed0013654 Sechium edule HOM05D000003 ORTHO05D000126 1.7e-06 58.2 154 29.2
Atru.chr8.603 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-06 57.8 137 28.5
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 2.2e-06 57.8 135 26.7
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 2.2e-06 57.8 95 33.7
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 2.8e-06 57.4 138 36.2
TAR536G0007 Trochodendron aralioides HOM05D000003 ORTHO05D000126 2.8e-06 57.4 157 24.8
Hma1.2p1_1456F.1_g284630 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 3.7e-06 57.0 110 30.9
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.7e-06 57.0 113 29.2
QL05p068878 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-06 57.0 125 35.2
QL09p045506 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-06 57.0 138 25.4
QL08p039671 Quercus lobata HOM05D000003 ORTHO05D000126 4.8e-06 56.6 136 30.1
Atru.chr7.591 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-06 56.2 127 26.8
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 6.3e-06 56.2 280 22.9
Nitab4.5_0000128g0370 Nicotiana tabacum HOM05D007931 ORTHO05D000126 6.3e-06 56.2 188 24.5
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 8.2e-06 55.8 110 34.5
QL01p020507 Quercus lobata HOM05D000003 ORTHO05D000126 8.2e-06 55.8 128 28.9
QL02p054646 Quercus lobata HOM05D000003 ORTHO05D000126 8.2e-06 55.8 156 26.9


User provided reference genes

Program Settings