Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.6e-143 513.1 300 100.0
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 5.2e-78 295.4 302 61.6
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.6e-71 273.9 299 56.2
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 4.2e-67 259.2 295 60.7
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.2e-53 214.5 304 45.7
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.4e-51 207.6 298 43.6
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 7.1e-51 205.3 305 46.2
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 6.0e-50 202.2 300 45.7
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 7.9e-50 201.8 260 45.4
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.0e-49 201.4 275 45.5
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.3e-49 200.3 301 44.9
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 7.4e-48 195.3 277 39.4
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.8e-47 193.4 271 40.6
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 3.7e-47 193.0 312 38.1
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 6.3e-47 192.2 263 48.3
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 3.1e-46 189.9 275 46.5
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 5.3e-46 189.1 294 46.9
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.5e-45 187.6 303 48.2
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 2.6e-45 186.8 263 47.5
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 7.6e-45 185.3 267 48.3
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 1.3e-44 184.5 308 47.1
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 2.2e-44 183.7 272 47.4
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 2.5e-43 180.3 263 38.4
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 2.5e-43 180.3 321 35.5
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 7.2e-43 178.7 276 44.9
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 7.2e-43 178.7 298 41.6
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.2e-42 177.9 276 39.9
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.6e-42 177.6 260 42.7
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 3.6e-42 176.4 289 38.4
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 4.6e-42 176.0 265 43.4
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 7.9e-42 175.3 273 39.9
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 3.0e-41 173.3 277 37.2
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 3.9e-41 172.9 305 38.0
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 5.1e-41 172.6 265 40.8
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 5.1e-41 172.6 299 38.8
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 2.5e-40 170.2 311 37.3
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 4.3e-40 169.5 280 39.6
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.3e-39 167.9 268 38.8
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.3e-39 167.9 309 42.4
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 6.3e-39 165.6 298 46.3
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.4e-38 164.5 275 37.1
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 3.1e-38 163.3 278 39.2
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 6.9e-38 162.2 188 44.1
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.0e-37 160.6 266 35.3
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 1.7e-36 157.5 302 34.8
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 3.8e-36 156.4 189 42.9
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 3.8e-36 156.4 272 34.9
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 3.8e-36 156.4 295 35.3
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.9e-35 154.1 263 36.1
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 3.2e-35 153.3 255 37.3
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 3.2e-35 153.3 277 39.7
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 9.4e-35 151.8 300 33.7
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 2.1e-34 150.6 251 45.0
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.7e-34 150.2 309 43.7
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.7e-34 150.2 309 43.7
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 3.6e-34 149.8 301 43.9
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 4.7e-34 149.4 298 41.9
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 4.7e-34 149.4 269 46.1
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 6.1e-34 149.1 241 42.7
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 6.1e-34 149.1 255 35.7
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 1.0e-33 148.3 263 36.9
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 2.3e-33 147.1 196 40.3
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 3.0e-33 146.7 302 44.4
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 6.7e-33 145.6 301 43.9
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.1e-32 144.8 276 33.0
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 1.1e-32 144.8 279 41.2
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.5e-32 144.4 260 38.5
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.5e-32 144.4 260 38.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.0e-32 144.1 278 40.6
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.0e-32 144.1 299 44.5
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 2.6e-32 143.7 248 39.9
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 3.3e-32 143.3 252 43.7
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 3.3e-32 143.3 197 40.6
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 4.4e-32 142.9 229 38.0
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 4.4e-32 142.9 308 34.7
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 3.7e-31 139.8 261 44.4
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 1.1e-30 138.3 193 37.3
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.1e-30 138.3 305 42.3
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 4.1e-30 136.3 298 35.9
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 4.1e-30 136.3 272 44.1
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 5.9e-29 132.5 309 32.7
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 5.0e-28 129.4 302 34.1
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 8.5e-28 128.6 273 41.0
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.1e-27 128.3 273 42.1
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.1e-27 128.3 321 35.5
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.4e-27 127.9 324 31.5
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.9e-27 127.5 154 43.5
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 6.1e-26 122.5 323 30.7
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 2.0e-24 117.5 154 40.9
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 4.4e-24 116.3 167 40.7
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.4e-24 116.3 217 50.2
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 7.0e-22 109.0 108 47.2
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.0e-13 80.9 98 43.9
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.3e-12 78.2 279 30.5
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.5e-11 74.7 129 34.9
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 2.6e-08 63.9 115 33.9
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 4.8e-07 59.7 119 48.7
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 3.1e-06 57.0 118 32.2


User provided reference genes

Program Settings